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13_1_20cm_4_scaffold_1146

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1146_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3..896)
DNA (894bp) protein (298aa)
DNA polymerase III, delta subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1F9_9BACT
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EDY19571.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA polymerase III subunit delta
13_1_20cm_4_scaffold_1146_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(917..1840)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1F4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19566.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_1146_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1876..4131)
DNA (2256bp) protein (752aa)
UvrABC system protein B n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1F3_9BACT rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
13_1_20cm_4_scaffold_1146_4

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4203..6239
DNA (2037bp) protein (679aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B6BECD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49069.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_1146_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6179..6970
DNA (792bp) protein (264aa)
Adenylate cyclase {ECO:0000313|EMBL:KGJ90481.1}; EC=4.6.1.1 {ECO:0000313|EMBL:KGJ90481.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalas
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI00036A1CD2
protein kinase
13_1_20cm_4_scaffold_1146_6

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7101..7775
DNA (675bp) protein (225aa)
Serine/threonine protein kinase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFQ2_9BACT
Marine sediment metagenome DNA, contig: S03H2_L03226 {ECO:0000313|EMBL:GAH39285.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_20cm_4_scaffold_1146_7
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(7776..8648)
DNA (873bp) protein (291aa)
peptidase M50 Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Peptidase M50 id=3806613 bin=GWF2_Lentisphaerae_49_21 species=Clostridium beijerinckii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Zn-dependent protease
13_1_20cm_4_scaffold_1146_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8780..10243)
DNA (1464bp) protein (488aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D456_9BACT
Carbohydrate kinase, YjeF related protein {ECO:0000313|EMBL:EDY18657.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
carbohydrate kinase
13_1_20cm_4_scaffold_1146_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10274..11212)
DNA (939bp) protein (313aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Cell wall hydrolase/autolysin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D457_9BACT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EDY18658.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_1146_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(11216..12124)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTR1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21949.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_1146_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12135..12818)
DNA (684bp) protein (228aa)
Response regulator receiver protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT52_9BACT
response regulator receiver protein Tax=RBG_16_Deltaproteobacteria_54_11_curated
13_1_20cm_4_scaffold_1146_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12818..13939)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTR3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21951.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_1146_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13986..14456)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVY7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21579.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ACT domain-containing protein
13_1_20cm_4_scaffold_1146_14
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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14643..16100
DNA (1458bp) protein (486aa)
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
lysyl-tRNA synthetase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017446EC rbh
lysyl-tRNA synthetase
Displaying 14 items

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