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13_1_20cm_4_scaffold_3044

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3044_1

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3..374
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA13146.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_4_scaffold_3044_2

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407..1186
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00036F778E
Uncharacterized protein {ECO:0000313|EMBL:AIA13705.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_3044_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1460..1960)
DNA (501bp) protein (167aa)
Amino acid transporter n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9U4_SINAD
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) {ECO:0000313|EMBL:CDM66820.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" sour
amino acid transporter
13_1_20cm_4_scaffold_3044_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1957..2733)
DNA (777bp) protein (259aa)
Amino acid transporter n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9U4_SINAD
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) {ECO:0000313|EMBL:CDM66820.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" sour
amino acid transporter
13_1_20cm_4_scaffold_3044_5
Bacillus sp. 17376, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2947..3708)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Bacillus sp. 17376 RepID=V6SZS4_9BACI
UPF0271 protein G3A_12275 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=977905 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 17376.;"
LamB/YcsF family protein
13_1_20cm_4_scaffold_3044_6
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3705..4820)
DNA (1116bp) protein (372aa)
Urea amidolyase-like protein n=2 Tax=Paenibacillus mucilaginosus RepID=H6NIN6_9BACL
Uncharacterized protein {ECO:0000313|EMBL:AGN70807.1}; TaxID=997761 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus K02.;"
hypothetical protein
13_1_20cm_4_scaffold_3044_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4855..5583)
DNA (729bp) protein (243aa)
Allophanate hydrolase subunit 1 n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WUZ3_KYRT2
Kinase inhibitor {ECO:0000313|EMBL:KGM32859.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06
allophanate hydrolase subunit 1
13_1_20cm_4_scaffold_3044_8
unknown

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comp(5641..5790)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_4_scaffold_3044_9
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5882..6475)
DNA (594bp) protein (198aa)
YceI-like family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MRM1_CORCM
YceI-like family protein {ECO:0000313|EMBL:AFE10781.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Co
yceI1; hypothetical protein
13_1_20cm_4_scaffold_3044_10
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(6954..7340)
DNA (387bp) protein (129aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
dihydrolipoamide dehydrogenase Tax=GWA1_Bdellovibrionales_52_35_curated
Dihydrolipoyl dehydrogenase id=3415197 bin=GWA1_Deltaproteobacteria_52_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
13_1_20cm_4_scaffold_3044_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(7297..8229)
DNA (933bp) protein (311aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycet
Dihydrolipoyl dehydrogenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DP34_SINAD
dihydrolipoamide dehydrogenase
13_1_20cm_4_scaffold_3044_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8320..9591)
DNA (1272bp) protein (424aa)
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D137_9BACT
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase {ECO:0000313|EMBL:EDY20049.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source=
2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase
13_1_20cm_4_scaffold_3044_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9703..12105)
DNA (2403bp) protein (801aa)
2-oxoglutarate dehydrogenase, E1 subunit (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D136_9BACT
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:EDY20048.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying 13 items

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