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13_1_20cm_4_scaffold_332

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_332_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(2..199)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D219_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19781.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_332_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(264..1352)
DNA (1089bp) protein (363aa)
alr; Alanine racemase; K01775 alanine racemase [EC:5.1.1.1] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6I5_9BACT
13_1_20cm_4_scaffold_332_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1349..1954)
DNA (606bp) protein (202aa)
Peptidase M22 glycoprotease n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D451_9BACT
Peptidase M22 glycoprotease {ECO:0000313|EMBL:EDY18652.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
peptidase M22 glycoprotease
13_1_20cm_4_scaffold_332_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1951..2439)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D452_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18653.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_332_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(2417..3310)
DNA (894bp) protein (298aa)
Thiamine-monophosphate kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D453_9BACT
Thiamine-monophosphate kinase {ECO:0000313|EMBL:EDY18654.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiamine-monophosphate kinase
13_1_20cm_4_scaffold_332_6
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3307..4134)
DNA (828bp) protein (276aa)
Abortive infection protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D454_9BACT
CAAX amino terminal protease family protein; K07052 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
metal-dependent membrane protease
13_1_20cm_4_scaffold_332_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4150..5160)
DNA (1011bp) protein (337aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D455_9BACT rbh
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:EDY18656.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flav
sppA; Periplasmic serine protease, ClpP class
13_1_20cm_4_scaffold_332_8
unknown

Not on your lists

5324..5557
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_4_scaffold_332_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5590..5967)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBK2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62887.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_1_20cm_4_scaffold_332_trna_1
unknown

Not on your lists

6074..6147
DNA (74bp)
transferRNA
13_1_20cm_4_scaffold_332_10
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6215..7240)
DNA (1026bp) protein (342aa)
6-O-methylguanine DNA methyltransferase n=1 Tax=Paenibacillus elgii RepID=UPI000248C936
Cysteine methyltransferase {ECO:0000313|EMBL:KEQ23170.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
hypothetical protein
13_1_20cm_4_scaffold_332_11
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(7367..7831)
DNA (465bp) protein (155aa)
thioesterase superfamily protein Tax=GWB1_Bdellovibrionales_55_8_curated
Thioesterase superfamily id=3676584 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
thioesterase superfamily protein
13_1_20cm_4_scaffold_332_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7852..8988)
DNA (1137bp) protein (379aa)
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
Citrate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D805_9BACT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_332_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9032..9904)
DNA (873bp) protein (291aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoni
methylisocitrate lyase (EC:2.7.8.23)
Methylisocitrate lyase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D804_9BACT
13_1_20cm_4_scaffold_332_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9907..11271)
DNA (1365bp) protein (455aa)
2-methylcitrate dehydratase {ECO:0000313|EMBL:EDY17357.1}; EC=4.2.1.79 {ECO:0000313|EMBL:EDY17357.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthon
Uncharacterized protein involved in propionate catabolism (EC:4.2.1.79)
2-methylcitrate dehydratase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D803_9BACT
13_1_20cm_4_scaffold_332_15
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11440..12795
DNA (1356bp) protein (452aa)
succinyl-CoA:3-ketoacid-coenzyme A transferase 1; K01027 3-oxoacid CoA-transferase [EC:2.8.3.5] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Acetate CoA-transferase YdiF n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RHJ2_MYCXE
succinyl-CoA:3-ketoacid-CoA transferase
13_1_20cm_4_scaffold_332_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(12785..14098)
DNA (1314bp) protein (438aa)
Permeases of the major facilitator superfamily n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZS7_PELTS
ProP; major facilitator superfamily permease Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ProP; major facilitator superfamily permease
13_1_20cm_4_scaffold_332_17
unknown

Not on your lists

14202..14612
DNA (411bp) protein (137aa)

This feature has no annotations

Displaying 18 items

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