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13_1_20cm_4_scaffold_356

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_356_1
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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220..615
DNA (396bp) protein (132aa)
30S ribosomal protein S13 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ5_9BACT
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
rpsM; 30S ribosomal protein S13
13_1_20cm_4_scaffold_356_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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621..1244
DNA (624bp) protein (208aa)
30S ribosomal protein S11 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ6_9BACT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S11
13_1_20cm_4_scaffold_356_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1250..1861
DNA (612bp) protein (204aa)
30S ribosomal protein S4 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ7_9BACT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S4
13_1_20cm_4_scaffold_356_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1871..2263)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D097_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20411.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_356_5
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

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2268..2660
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174506F
Chemotaxis protein CheY {ECO:0000313|EMBL:EDP75522.1}; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
13_1_20cm_4_scaffold_356_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3129..3545
DNA (417bp) protein (139aa)
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein id=14625221 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_356_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3554..4219
DNA (666bp) protein (222aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9V7_9BACT
13_1_20cm_4_scaffold_356_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4327..6042
DNA (1716bp) protein (572aa)
Type II and III secretion system protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9V8_9BACT
Type II and III secretion system protein {ECO:0000313|EMBL:EDY16772.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fla
pilQ; type IV pilus biogenesis protein PilQ
13_1_20cm_4_scaffold_356_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6104..6703)
DNA (600bp) protein (200aa)
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR9_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_4_scaffold_356_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6724..7995
DNA (1272bp) protein (424aa)
Radical SAM domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR8_9BACT
Radical SAM domain protein {ECO:0000313|EMBL:EDY21860.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiH; thiamine biosynthesis enzyme ThiH or related uncharacterized enzyme
13_1_20cm_4_scaffold_356_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7999..8772
DNA (774bp) protein (258aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=497964 species=
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR7_9BACT
hypothetical protein
13_1_20cm_4_scaffold_356_12
unknown

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comp(8786..9172)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_20cm_4_scaffold_356_13
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9385..10986
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI0003791061 rbh
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDD98004.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; envir
single-stranded-DNA-specific exonuclease RecJ
13_1_20cm_4_scaffold_356_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10986..13043
DNA (2058bp) protein (686aa)
ATP-dependent DNA helicase RecG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2B7_9BACT
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EDY19357.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DEAD/DEAH box helicase
13_1_20cm_4_scaffold_356_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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13044..14225
DNA (1182bp) protein (394aa)
2-alkenal reductase {ECO:0000313|EMBL:EDY19358.1}; EC=1.3.1.74 {ECO:0000313|EMBL:EDY19358.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter
2-alkenal reductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2B8_9BACT rbh
protease Do
Displaying 15 items

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