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13_1_20cm_4_scaffold_7771

Search features with annotation key words

Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_7771_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2..169
DNA (168bp) protein (56aa)
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EDY21252.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EDY21252.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Ch
Ribose-phosphate diphosphokinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYA4_9BACT
13_1_20cm_4_scaffold_7771_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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175..918
DNA (744bp) protein (248aa)
50S ribosomal protein L25 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYA3_9BACT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=497964 sp
50S ribosomal protein L25
13_1_20cm_4_scaffold_7771_3
GWA2_OP11_47_9, Gottesmanbacteria, Microgenomates, Bacteria

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1009..1605
DNA (597bp) protein (199aa)
Peptidyl-tRNA hydrolase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TBA4_HELMI
Peptidyl-tRNA hydrolase Tax=GWA2_OP11_47_9
pth; peptidyl-tRNA hydrolase
13_1_20cm_4_scaffold_7771_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1602..1949
DNA (348bp) protein (116aa)
30S ribosomal protein S6 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYA1_9BACT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_7771_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1968..2429
DNA (462bp) protein (154aa)
Single-stranded DNA-binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYA0_9BACT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spa
single-strand binding protein
13_1_20cm_4_scaffold_7771_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2492..3592
DNA (1101bp) protein (367aa)
DNA protecting protein DprA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D957_9BACT rbh
DNA protecting protein DprA {ECO:0000313|EMBL:EDY17102.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA protecting protein DprA
13_1_20cm_4_scaffold_7771_7
unknown

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comp(3439..3942)
DNA (504bp) protein (168aa)

This feature has no annotations

13_1_20cm_4_scaffold_7771_8
unknown

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comp(3973..4560)
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_20cm_4_scaffold_7771_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4740..5828
DNA (1089bp) protein (363aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=320771 species="Bacteria; Verrucomi
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL73_9BACT
13_1_20cm_4_scaffold_7771_10
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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5903..6415
DNA (513bp) protein (171aa)
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=GWF2_Lentisphaerae_57_35_curated
Transcriptional repressor NrdR id=3744708 bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
ATP-cone domain-containing protein
13_1_20cm_4_scaffold_7771_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6402..6959
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D973_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16976.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_7771_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6982..7320
DNA (339bp) protein (113aa)
Histidine triad (HIT) protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D974_9BACT
Histidine triad (HIT) protein {ECO:0000313|EMBL:EDY16977.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
zinc-binding protein
13_1_20cm_4_scaffold_7771_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7334..8302
DNA (969bp) protein (323aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025L3_SOLUE
pyridoxal-5'-phosphate-dependent protein subunit beta
13_1_20cm_4_scaffold_7771_14
unknown

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comp(8358..8705)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_20cm_4_scaffold_7771_15
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(8706..8954)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174536F
ErfK/YbiS/YcfS/YnhG family protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
ErfK/YbiS/YcfS/YnhG family protein
Displaying 15 items

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