ggKbase home page

13_1_20cm_4_scaffold_1142

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1142_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(1..1182)
DNA (1182bp) protein (394aa)
amidohydrolase 3; K07047 Tax=CSP1_3_Armatimonadetes
amidohydrolase 3; K07047 id=14632547 bin=bin9_gal15 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
amidohydrolase 3
13_1_20cm_4_scaffold_1142_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

1349..2530
DNA (1182bp) protein (394aa)
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EFH89675.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EFH89675.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedono
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJR8_9CHLR
13_1_20cm_4_scaffold_1142_3
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2546..3337
DNA (792bp) protein (264aa)
Putative amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6APK4_PSERE
Putative amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAN47618.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Ps
putative amino acid ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_1142_4
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3351..4088
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036F94E8
Amino acid ABC transporter permease {ECO:0000313|EMBL:KHK95834.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.
polar amino acid ABC transporter inner membrane subunit
13_1_20cm_4_scaffold_1142_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4085..4822
DNA (738bp) protein (246aa)
ABC transporter related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYA5_THIK1
ABC transporter related protein {ECO:0000313|EMBL:ADG30213.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12
ABC transporter
13_1_20cm_4_scaffold_1142_6
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4980..5492
DNA (513bp) protein (171aa)
Transposase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H2H4_9GAMM
Transposase {ECO:0000313|EMBL:AGA91855.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
transposase
13_1_20cm_4_scaffold_1142_7
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(5796..6419)
DNA (624bp) protein (208aa)
Phospholipase/Carboxylesterase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3C9_CONWI
phospholipase/carboxylesterase; K06999 phospholipase/carboxylesterase Tax=RBG_16_Armatimonadetes_67_12_curated
phospholipase/carboxylesterase
13_1_20cm_4_scaffold_1142_8
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

6443..7363
DNA (921bp) protein (307aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA64_CONWI
glyoxalase/bleomycin resistance protein/dioxygenase; K15975 glyoxalase family protein Tax=RBG_16_Armatimonadetes_67_12_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_4_scaffold_1142_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7331..8335)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B33E00
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_1142_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8407..8883
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003765856
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
13_1_20cm_4_scaffold_1142_11
unknown

Not on your lists

8880..9110
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_4_scaffold_1142_12
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9158..9544
DNA (387bp) protein (129aa)
ATPase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WMJ4_MYCKA
Uncharacterized protein {ECO:0000313|EMBL:AIY41644.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
hypothetical protein
13_1_20cm_4_scaffold_1142_13
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9599..10612
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9S1_9DELT id=5225741 bin=16ft_combo_ws3_JS1 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Lactonase, 7-bladed beta-propeller {ECO:0000313|EMBL:GAO01742.1}; Flags: Precursor;; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobac
hypothetical protein
13_1_20cm_4_scaffold_1142_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

10635..11261
DNA (627bp) protein (209aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF7_ANADF
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_4_scaffold_1142_15
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11258..11503
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI000380ED50
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ABM11619.1}; TaxID=350058 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanb
putative transmembrane anti-sigma factor
13_1_20cm_4_scaffold_1142_16
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11500..12000
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF5_ANADF
Uncharacterized protein {ECO:0000313|EMBL:GAO01736.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
hypothetical protein
13_1_20cm_4_scaffold_1142_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12030..12467
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBW6_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB51381.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
hypothetical protein
13_1_20cm_4_scaffold_1142_18
Streptomyces sp. BoleA5, Streptomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12667..13299
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00037A58F0
13_1_20cm_4_scaffold_1142_19
Burkholderia sp. A9, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13289..14314)
DNA (1026bp) protein (342aa)
zinc-dependent alcohol dehydrogenase oxidoreductase (EC:1.1.1.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DDE57
IMP dehydrogenase {ECO:0000313|EMBL:KHK59511.1}; TaxID=1365108 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. A9.;"
13_1_20cm_4_scaffold_1142_20
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

14341..14628
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIE5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84457.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
cupin 2
Displaying 20 items

View Taxonomy