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13_1_20cm_4_scaffold_2089

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2089_1
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2..733)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B39954
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_1_20cm_4_scaffold_2089_2
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(749..1249)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W3X4_MAGSA
Uncharacterized protein {ECO:0000313|EMBL:KIC09083.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
13_1_20cm_4_scaffold_2089_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1328..2368)
DNA (1041bp) protein (347aa)
DNA repair protein radA n=1 Tax=Patulibacter medicamentivorans RepID=H0E1E2_9ACTN
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter
DNA repair protein RadA
13_1_20cm_4_scaffold_2089_4
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2666..3283
DNA (618bp) protein (206aa)
Methyltransferase type 11 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SH45_THEM7
Putative methyltransferase {ECO:0000313|EMBL:CCH77236.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
type 11 methyltransferase
13_1_20cm_4_scaffold_2089_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3280..3864)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFQ5_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:ACV78016.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700
hypothetical protein
13_1_20cm_4_scaffold_2089_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3869..6391)
DNA (2523bp) protein (841aa)
ATPase AAA-2 domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F133_CONWI rbh
ATPase AAA-2 domain protein {ECO:0000313|EMBL:ADB50109.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter
ATPase AAA
13_1_20cm_4_scaffold_2089_7
unknown

Not on your lists

6608..7411
DNA (804bp) protein (268aa)

This feature has no annotations

13_1_20cm_4_scaffold_2089_8
unknown

Not on your lists

comp(7949..8629)
DNA (681bp) protein (227aa)

This feature has no annotations

13_1_20cm_4_scaffold_2089_9
unknown

Not on your lists

comp(8710..9204)
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_20cm_4_scaffold_2089_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9556..10929)
DNA (1374bp) protein (458aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F132_CONWI
lysyl-tRNA synthetase
13_1_20cm_4_scaffold_2089_11
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10926..11549)
DNA (624bp) protein (208aa)
polysaccharide deacetylase n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI0003621E14
glycosyl transferase, family 2 Tax=RBG_16_Elusimicrobia_66_12_curated
polysaccharide deacetylase
13_1_20cm_4_scaffold_2089_12
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11664..12137)
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=1 Tax=Thermincola potens (strain JR) RepID=D5X9P6_THEPJ
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=635013 species="Bacteria
GreA/GreB family elongation factor
13_1_20cm_4_scaffold_2089_13
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

12252..13316
DNA (1065bp) protein (355aa)
tRNA-dihydrouridine synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F130_CONWI
dihydrouridine synthase Tax=RBG_13_Actinobacteria_63_9_curated
dihydrouridine synthase
13_1_20cm_4_scaffold_2089_14
Zea mays, Zea, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(13325..13966)
DNA (642bp) protein (214aa)
Extensin-like protein n=2 Tax=Zea mays RepID=Q9SPM0_MAIZE
Extensin-like protein {ECO:0000313|EMBL:AAD55980.2}; TaxID=4577 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; P
hypothetical protein
13_1_20cm_4_scaffold_2089_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14015..14989)
DNA (975bp) protein (325aa)
Diguanylate cyclase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9G7_CONWI
Diguanylate cyclase {ECO:0000313|EMBL:ADB49134.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
diguanylate cyclase
13_1_20cm_4_scaffold_2089_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15008..15757)
DNA (750bp) protein (250aa)
pantothenate kinase (EC:2.7.1.33); K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=RBG_16_Actinobacteria_67_10_curated
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=COAX_MOOTA
13_1_20cm_4_scaffold_2089_17
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15764..16462)
DNA (699bp) protein (233aa)
7, 8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47B68_DECAR
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
13_1_20cm_4_scaffold_2089_18
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16497..17981
DNA (1485bp) protein (495aa)
Thermitase domain protein {ECO:0000313|EMBL:EGW39902.1}; EC=3.4.21.66 {ECO:0000313|EMBL:EGW39902.1};; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfospor
Thermitase domain protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FQW3_9FIRM
putative subtilase-family protease
13_1_20cm_4_scaffold_2089_19
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17962..18294)
DNA (333bp) protein (111aa)
Dihydroneopterin aldolase {ECO:0000313|EMBL:CEG99155.1}; EC=4.1.2.25 {ECO:0000313|EMBL:CEG99155.1};; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propioniba
folB; dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GG60_PROFC
13_1_20cm_4_scaffold_2089_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18291..18848)
DNA (558bp) protein (186aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RBG_16_Actinobacteria_68_12_curated
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F125_CONWI
13_1_20cm_4_scaffold_2089_21
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

18934..19641
DNA (708bp) protein (236aa)
Putative ABC transporter permease/ATP-binding protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5APW5_9ACTN
Putative ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:BAN03235.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter
putative ABC transporter permease/ATP-binding protein
Displaying 21 items

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