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13_1_20cm_4_scaffold_23012

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_23012_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(1..246)
DNA (246bp) protein (82aa)
DNA gyrase B subunit (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_23012_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(361..1971)
DNA (1611bp) protein (537aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1097667 species="Bacteria; A
DNA gyrase B subunit (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Patulibacter medicamentivorans RepID=H0E9J0_9ACTN
13_1_20cm_4_scaffold_23012_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2094..3428)
DNA (1335bp) protein (445aa)
DNA replication and repair protein RecF n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYQ6_CONWI
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF Tax=RBG_16_Actinobacteria_68_12_curated
DNA replication and repair protein RecF
13_1_20cm_4_scaffold_23012_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3448..4578)
DNA (1131bp) protein (377aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RBG_16_Actinobacteria_68_12_curated
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYQ5_CONWI
13_1_20cm_4_scaffold_23012_5
unknown

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comp(4571..4699)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_20cm_4_scaffold_23012_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

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comp(4706..5944)
DNA (1239bp) protein (413aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9W5N7_9CYAN
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
dnaA; chromosomal replication initiation protein
13_1_20cm_4_scaffold_23012_7
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6565..6795
DNA (231bp) protein (77aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Ruminococcus albus 8 RepID=E9S9T8_RUMAL
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococ
conserved hypothetical protein
13_1_20cm_4_scaffold_23012_8
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6792..7712
DNA (921bp) protein (307aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3X2_CONWI
YidC/Oxa1 family membrane protein insertase; K03217 preprotein translocase subunit YidC Tax=RBG_16_Actinobacteria_64_13_curated
YidC/Oxa1 family membrane protein insertase
13_1_20cm_4_scaffold_23012_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7705..8163
DNA (459bp) protein (153aa)
Single-stranded nucleic acid binding R3H domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3X1_CONWI
Single-stranded nucleic acid binding R3H domain protein {ECO:0000313|EMBL:ADB54346.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexiba
single-stranded nucleic acid binding R3H domain-containing protein
13_1_20cm_4_scaffold_23012_10
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8237..8728
DNA (492bp) protein (164aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAH8_AMMDK
methyltransferase GidB
13_1_20cm_4_scaffold_23012_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8862..9371
DNA (510bp) protein (170aa)
Chromosome (Plasmid) partitioning protein ParA n=1 Tax=Patulibacter medicamentivorans RepID=H0E9K1_9ACTN
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein Tax=RBG_16_Actinobacteria_68_12_curated
Cobyrinic acid ac-diamide synthase
13_1_20cm_4_scaffold_23012_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9355..10203
DNA (849bp) protein (283aa)
ParB-like partition protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2PX85_9DELT
parB-like partition protein; K03497 chromosome partitioning protein, ParB family Tax=RBG_16_Actinobacteria_68_12_curated
parB-like partition protein
13_1_20cm_4_scaffold_23012_13
unknown

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10246..10497
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_20cm_4_scaffold_23012_trna_1
unknown

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10523..10596
DNA (74bp)
transferRNA
13_1_20cm_4_scaffold_23012_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10599..10976
DNA (378bp) protein (126aa)
CBS domain protein n=2 Tax=Thermus thermophilus RepID=Q5SLE4_THET8
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
inosine-5'-monophosphate dehydrogenase
13_1_20cm_4_scaffold_23012_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11063..11569
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3W6_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB54341.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_4_scaffold_23012_16
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(11566..11862)
DNA (297bp) protein (99aa)
Prephenate dehydratase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGB9_DESAR
chorismate mutase Tax=RBG_16_Acidobacteria_64_8_curated
prephenate dehydratase
13_1_20cm_4_scaffold_23012_17
unknown

Not on your lists

comp(11844..11948)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 18 items

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