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13_1_20cm_4_scaffold_48

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_48_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(24..1718)
DNA (1695bp) protein (565aa)
DNA-dependent DNA polymerase family X n=1 Tax=Patulibacter medicamentivorans RepID=H0E2J4_9ACTN
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=RBG_16_Actinobacteria_68_12_curated
PHP domain-containing protein
13_1_20cm_4_scaffold_48_2
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1736..2446
DNA (711bp) protein (237aa)
Glycosyl transferase family 2 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHR5_ANASK
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACG73935.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
family 2 glycosyl transferase
13_1_20cm_4_scaffold_48_3
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2464..2787
DNA (324bp) protein (108aa)
thioredoxin n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6294B
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
hypothetical protein
13_1_20cm_4_scaffold_48_4
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(2761..3576)
DNA (816bp) protein (272aa)
thiL; thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RBG_13_Chloroflexi_53_26_curated
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAP1_AMMDK
13_1_20cm_4_scaffold_48_5
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(3563..4123)
DNA (561bp) protein (187aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY57_THERP
13_1_20cm_4_scaffold_48_6
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

comp(4120..4914)
DNA (795bp) protein (265aa)
hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=THIM_RUBXD
hydroxyethylthiazole kinase Tax=RBG_16_Armatimonadetes_58_9_curated
13_1_20cm_4_scaffold_48_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4911..5714)
DNA (804bp) protein (268aa)
Phosphomethylpyrimidine kinase type-2 {ECO:0000313|EMBL:ABG05705.1}; EC=2.7.4.7 {ECO:0000313|EMBL:ABG05705.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobac
phosphomethylpyrimidine kinase type-2 (EC:2.7.4.7)
phosphomethylpyrimidine kinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B63B1E
13_1_20cm_4_scaffold_48_8
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5918..6310
DNA (393bp) protein (131aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X0N4_STRVR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFL31298.1}; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridoc
hypothetical protein
13_1_20cm_4_scaffold_48_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6307..8553
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0P2_CONWI
hypothetical protein; K06877 DEAD/DEAH box helicase domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_48_10
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

8682..8972
DNA (291bp) protein (97aa)
Putative acetyltransferase {ECO:0000313|EMBL:BAJ64792.1}; EC=2.3.1.- {ECO:0000313|EMBL:BAJ64792.1};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerol
putative acetyltransferase (EC:2.3.1.-)
Putative acetyltransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N149_ANATU
13_1_20cm_4_scaffold_48_11
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

9020..10657
DNA (1638bp) protein (546aa)
Ig domain protein group 1 domain protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TU55_9CYAN
Ig domain protein group 1 domain protein {ECO:0000313|EMBL:AFY86352.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203
Ig domain-containing protein group 1 domain-containing protein
13_1_20cm_4_scaffold_48_12
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10654..12222
DNA (1569bp) protein (523aa)
PKD domain containing protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C072_BEUC1
PKD domain containing protein {ECO:0000313|EMBL:ACQ79258.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC
PKD domain-containing protein
13_1_20cm_4_scaffold_48_13
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12286..12633
DNA (348bp) protein (116aa)
YCII-related protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LRT1_9ACTO
YCII-related protein {ECO:0000313|EMBL:AGL17930.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
YCII-related protein
13_1_20cm_4_scaffold_48_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12630..12998
DNA (369bp) protein (123aa)
YCII-related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TWJ8_9CHLR
DGPF domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
DGPF domain-containing protein
13_1_20cm_4_scaffold_48_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13037..14188
DNA (1152bp) protein (384aa)
rpoE; RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14629878 bin=bin8_Chloro species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi rbh
rpoE; RNA polymerase ECF-subfamily sigma factor
13_1_20cm_4_scaffold_48_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14199..15449
DNA (1251bp) protein (417aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=RBG_16_Actinobacteria_68_12_curated
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QHG8_CATAD rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_4_scaffold_48_17
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15442..16068
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI00034DE8A9
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:AGZ46699.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DS
GCN5-like N-acetyltransferase
13_1_20cm_4_scaffold_48_18
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16105..17571
DNA (1467bp) protein (489aa)
Metal dependent phosphohydrolase n=1 Tax=Paenibacillus sp. P22 RepID=T2LT51_9BACL
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDN43602.1}; TaxID=483908 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
metal dependent phosphohydrolase
13_1_20cm_4_scaffold_48_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17525..19855)
DNA (2331bp) protein (777aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00035DC9F9
DNA ligase D
13_1_20cm_4_scaffold_48_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20126..21058)
DNA (933bp) protein (311aa)
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RBG_16_Actinobacteria_68_12_curated
accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U646_OCEP5
13_1_20cm_4_scaffold_48_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21048..21893)
DNA (846bp) protein (282aa)
accD; acetyl-CoA carboxylase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RBG_16_Actinobacteria_68_12_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) RepID=D3SN24_THEAH
acetyl-CoA carboxylase, carboxyl transferase subunit beta
13_1_20cm_4_scaffold_48_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21932..22708)
DNA (777bp) protein (259aa)
arginase; K01476 arginase [EC:3.5.3.1] Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein n=1 Tax=Nocardiopsis RepID=UPI000349841F
arginase
13_1_20cm_4_scaffold_48_23
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(22705..23622)
DNA (918bp) protein (306aa)
GCN5-related N-acetyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2H7_SPHTD
N-acetyltransferase GCN5
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_20cm_4_scaffold_48_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(23603..24232)
DNA (630bp) protein (210aa)
HAD family hydrolase n=1 Tax=Williamsia sp. D3 RepID=V8CZX2_9ACTO
HAD family hydrolase Tax=RBG_16_Actinobacteria_68_12_curated
HAD family hydrolase
13_1_20cm_4_scaffold_48_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(24242..25495)
DNA (1254bp) protein (418aa)
3-oxoacyl-ACP synthase (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RBG_16_Actinobacteria_68_12_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Paenibacillus lactis 154 RepID=G4HLU4_9BACL
3-oxoacyl-ACP synthase
13_1_20cm_4_scaffold_48_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(25495..26118)
DNA (624bp) protein (208aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_16_Actinobacteria_68_12_curated
3-oxoacyl-ACP synthase n=1 Tax=Salisaeta longa RepID=UPI0003B74B9B
3-oxoacyl-ACP reductase
13_1_20cm_4_scaffold_48_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(26219..27178)
DNA (960bp) protein (320aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RBG_16_Actinobacteria_68_12_curated
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3E6Z8_GEOS4
malonyl CoA-acyl carrier protein transacylase
13_1_20cm_4_scaffold_48_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(27145..28134)
DNA (990bp) protein (330aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RBG_16_Actinobacteria_68_12_curated
3-oxoacyl-ACP synthase n=1 Tax=Cohnella laeviribosi RepID=UPI00037CD23D
3-oxoacyl-ACP synthase
13_1_20cm_4_scaffold_48_29
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28134..28553)
DNA (420bp) protein (140aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=2 Tax=Bacillus cereus RepID=J8NPJ4_BACCE
fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
13_1_20cm_4_scaffold_48_30
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(28550..29158)
DNA (609bp) protein (203aa)
RNA polymerase sigma factor, sigma-70 family Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
RNA polymerase sigma factor, sigma-70 family id=24480312 bin=RBG_19FT_COMBO_GAL15_69_19 species=Streptomyces griseoaurantiacus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
RNA polymerase ECF-type sigma factor
Displaying items 1-30 of 38 in total

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