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13_1_20cm_4_scaffold_5200

Search features with annotation key words

Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_5200_1
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..909
DNA (909bp) protein (303aa)
shc; squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RL60_BLASD
Squalene-hopene cyclase {ECO:0000313|EMBL:EWT07891.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5
13_1_20cm_4_scaffold_5200_2
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1412..1912
DNA (501bp) protein (167aa)
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E4L6_GEOLS
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:ACD95952.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobac
hopanoid biosynthesis associated radical SAM protein HpnH
13_1_20cm_4_scaffold_5200_3
Streptomyces iakyrus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2324..3214
DNA (891bp) protein (297aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
hypothetical protein n=1 Tax=Nocardiopsis salina RepID=UPI00034D1866
13_1_20cm_4_scaffold_5200_4
unknown

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3211..3618
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_20cm_4_scaffold_5200_5
unknown

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3676..4305
DNA (630bp) protein (210aa)

This feature has no annotations

13_1_20cm_4_scaffold_5200_6
unknown

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4343..4621
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_4_scaffold_5200_7
unknown

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4605..5189
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_20cm_4_scaffold_5200_8
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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5186..6427
DNA (1242bp) protein (414aa)
Copper resistance protein CopC n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTE2_ROSS1
Copper resistance protein CopC {ECO:0000313|EMBL:ABQ89895.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.
copper resistance protein CopC
13_1_20cm_4_scaffold_5200_9
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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6427..7452
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036F9AC9 rbh
Nucleoside-diphosphate-sugar epimerase Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
NAD-dependent epimerase/dehydratase
13_1_20cm_4_scaffold_5200_10
unknown

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comp(7398..7526)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_20cm_4_scaffold_5200_11
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7807..8223
DNA (417bp) protein (139aa)
ornithine cyclodeaminase n=1 Tax=Streptomyces canus RepID=UPI0003607F59
Alanine dehydrogenase {ECO:0000313|EMBL:EDY60578.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
alanine dehydrogenase
13_1_20cm_4_scaffold_5200_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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8220..9170
DNA (951bp) protein (317aa)
citrate (Si)-synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RBG_16_Actinobacteria_67_10_curated
citrate (Si)-synthase (EC:2.3.3.1)
Citrate (Si)-synthase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B3I6_FRADG
13_1_20cm_4_scaffold_5200_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9239..10315
DNA (1077bp) protein (359aa)
Kynureninase {ECO:0000313|EMBL:CDM66962.1}; EC=3.7.1.3 {ECO:0000313|EMBL:CDM66962.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas me
kynureninase (EC:3.7.1.3)
Kynureninase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023I5_SOLUE
13_1_20cm_4_scaffold_5200_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10312..11139)
DNA (828bp) protein (276aa)
Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_4_scaffold_5200_15
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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11183..12085
DNA (903bp) protein (301aa)
Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_4_scaffold_5200_16
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12079..12573)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWV9_RUBXD
Uncharacterized protein {ECO:0000313|EMBL:ABG04119.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrob
hypothetical protein
13_1_20cm_4_scaffold_5200_17

Not on your lists

12596..13303
DNA (708bp) protein (236aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
Thymidylate synthase ThyX id=3211352 bin=GWA2_Elusimicrobia_69_24 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
thymidylate synthase, flavin-dependent
13_1_20cm_4_scaffold_5200_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13300..13923)
DNA (624bp) protein (208aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_5200_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13920..14537)
DNA (618bp) protein (206aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAA2_SPHTD
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Actinobacteria_68_12_curated
RNA polymerase, sigma-24 subunit, ECF subfamily
13_1_20cm_4_scaffold_5200_20
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14678..15298
DNA (621bp) protein (207aa)
Plastocyanin-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQR1_KORVE
Uncharacterized protein {ECO:0000313|EMBL:KJK42611.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Noc
plastocyanin-like protein
Displaying 20 items

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