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13_1_20cm_4_scaffold_834

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_834_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(1..324)
DNA (324bp) protein (108aa)
signal recognition particle protein Srp54 n=1 Tax=Brevibacillus sp. phR RepID=UPI0002D92929
ffh; signal recognition particle protein fifty-four homolog; K03106 signal recognition particle subunit SRP54 Tax=RBG_16_Actinobacteria_68_12_curated
signal recognition particle protein
13_1_20cm_4_scaffold_834_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

354..2441
DNA (2088bp) protein (696aa)
cyaI2; adenylate/guanylate cyclase (EC:4.6.1.1) Tax=RBG_16_Actinobacteria_68_12_curated
adenylate/guanylate cyclase id=14629842 bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
adenylate/guanylate cyclase
13_1_20cm_4_scaffold_834_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2398..3216
DNA (819bp) protein (273aa)
cyaI2; guanylate cyclase (EC:4.6.1.1) Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_834_4
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

3238..6312
DNA (3075bp) protein (1025aa)
adenylate/guanylate cyclase Tax=CSP1_4_Chloroflexi
adenylate/guanylate cyclase id=14629842 bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
adenylate/guanylate cyclase
13_1_20cm_4_scaffold_834_5

Not on your lists

6326..6538
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZC75_9EURY
Marine sediment metagenome DNA, contig: S01H1_S40920 {ECO:0000313|EMBL:GAG48150.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_20cm_4_scaffold_834_6
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6535..6972)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00036FBF10
Uncharacterized protein {ECO:0000313|EMBL:EWT02013.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
polyketide cyclase/dehydrase
13_1_20cm_4_scaffold_834_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6983..7933)
DNA (951bp) protein (317aa)
Signal recognition particle receptor FtsY n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E0_CONWI
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=RBG_16_Actinobacteria_68_12_curated
signal recognition particle-docking protein FtsY
13_1_20cm_4_scaffold_834_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7923..10439)
DNA (2517bp) protein (839aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B6D319
SMC domain-containing protein; K03529 chromosome segregation protein Tax=RBG_16_Actinobacteria_68_12_curated
chromosome segregation protein
13_1_20cm_4_scaffold_834_9
unknown

Not on your lists

comp(10488..10646)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_20cm_4_scaffold_834_10
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10677..10961)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYJ1_NITHN
Uncharacterized protein {ECO:0000313|EMBL:ADE15979.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
hypothetical protein
13_1_20cm_4_scaffold_834_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10997..11440)
DNA (444bp) protein (148aa)
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RBG_16_Actinobacteria_68_12_curated
rnc; ribonuclease 3 (EC:3.1.26.3)
ribonuclease III n=1 Tax=Streptomyces sp. AA0539 RepID=UPI00035ED4E4
13_1_20cm_4_scaffold_834_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11583..11828)
DNA (246bp) protein (82aa)
Acyl carrier protein n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SF19_9BACL
acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
acyl carrier protein
13_1_20cm_4_scaffold_834_13
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11835..12833)
DNA (999bp) protein (333aa)
plsX; glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_16_Actinobacteria_64_13_curated
Phosphate acyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDG9_THET1
fatty acid/phospholipid synthesis protein PlsX
13_1_20cm_4_scaffold_834_14
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13014..13676
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WPY7_ACTMD
Uncharacterized protein {ECO:0000313|EMBL:ACU35043.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC
hypothetical protein
13_1_20cm_4_scaffold_834_15
unknown

Not on your lists

comp(13690..14418)
DNA (729bp) protein (243aa)

This feature has no annotations

13_1_20cm_4_scaffold_834_16
Planomicrobium sp. ES2, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14415..14750)
DNA (336bp) protein (112aa)
NUDIX hydrolase n=1 Tax=Exiguobacterium sp. MH3 RepID=U6BB46_9BACL
RNA pyrophosphohydrolase {ECO:0000313|EMBL:CEG23409.1}; TaxID=1499687 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium sp. ES2.;"
NUDIX hydrolase
13_1_20cm_4_scaffold_834_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14765..15163)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E7_CONWI
hypothetical protein; K07040 uncharacterized protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_834_18
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15141..16172)
DNA (1032bp) protein (344aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
multidrug transporter
hypothetical protein SsomD4_18373 id=4290396 bin=GWC2_Chloroflexi_73_18 species=Streptomyces somaliensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_20cm_4_scaffold_834_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16340..17266
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000382C537
LysR family transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
LysR family transcriptional regulator
13_1_20cm_4_scaffold_834_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17310..18359
DNA (1050bp) protein (350aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9L5_CONWI
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:ADB51077.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
MreB/Mrl family cell shape determining protein
13_1_20cm_4_scaffold_834_21
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(18356..18871)
DNA (516bp) protein (172aa)
Archaeal/vacuolar-type H+-ATPase subunit H n=1 Tax=Patulibacter medicamentivorans RepID=H0E9S0_9ACTN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_20cm_4_scaffold_834_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18878..19393)
DNA (516bp) protein (172aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RBG_16_Actinobacteria_68_12_curated
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1F3_CONWI
13_1_20cm_4_scaffold_834_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19390..19929)
DNA (540bp) protein (180aa)
Methyltransferase small n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744C3F
methyltransferase Tax=RBG_16_Actinobacteria_68_12_curated
methyltransferase
13_1_20cm_4_scaffold_834_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19929..21023)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RDN5_9ACTO
Putative uncharacterized protein Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 24 items

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