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13_1_20cm_4_scaffold_956

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_956_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1..288
DNA (288bp) protein (96aa)
NADH dehydrogenase I subunit D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RBG_16_Actinobacteria_68_12_curated
NADH dehydrogenase I subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G703_CHLAD
13_1_20cm_4_scaffold_956_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

285..752
DNA (468bp) protein (156aa)
nuoE; NADH-quinone oxidoreductase subunit E 2 (NADH dehydrogenase I subunit E 2) (NDH-1 subunit E 2) (EC:1.6.99.5) Tax=RBG_16_Actinobacteria_68_12_curated
NADH dehydrogenase I subunit E id=3272603 bin=GWC2_Deltaproteobacteria_66_88 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
NADH-quinone oxidoreductase, E subunit
13_1_20cm_4_scaffold_956_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

742..2064
DNA (1323bp) protein (441aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_16_Actinobacteria_68_12_curated
nuoF; NADH-quinone oxidoreductase subunit F (NADH dehydrogenase I, chain F) (NDH-1, chain F) (EC:1.6.5.3 1.6.99.5)
NADH dehydrogenase I subunit F n=1 Tax=uncultured prokaryote RepID=H5SP84_9ZZZZ
13_1_20cm_4_scaffold_956_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2061..4181
DNA (2121bp) protein (707aa)
nuoG1; NADH dehydrogenase I subunit G; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=RBG_16_Actinobacteria_68_12_curated
NADH-quinone oxidoreductase, chain G n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDL2_CONWI
NADH-quinone oxidoreductase subunit G
13_1_20cm_4_scaffold_956_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4178..5173
DNA (996bp) protein (332aa)
nuoH; NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) (EC:1.6.5.3 1.6.99.5) Tax=RBG_16_Actinobacteria_68_12_curated
nuoH; NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) (EC:1.6.5.3 1.6.99.5) id=24483599 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
nuoH; NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) (EC:1.6.5.3 1.6.99.5)
13_1_20cm_4_scaffold_956_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5175..5669
DNA (495bp) protein (165aa)
NADH-quinone oxidoreductase subunit I; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RBG_16_Actinobacteria_68_12_curated
NADH-quinone oxidoreductase subunit I n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDL4_CONWI
NADH-quinone oxidoreductase subunit I
13_1_20cm_4_scaffold_956_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5669..6226
DNA (558bp) protein (186aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDL5_CONWI
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:ADB49589.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacte
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
13_1_20cm_4_scaffold_956_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6226..6543
DNA (318bp) protein (106aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit
NADH-quinone oxidoreductase subunit K n=1 Tax=Patulibacter medicamentivorans RepID=H0E149_9ACTN
NADH-ubiquinone oxidoreductase chain 4L
13_1_20cm_4_scaffold_956_9
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

6543..8423
DNA (1881bp) protein (627aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
nuoL; NADH-quinone oxidoreductase subunit L (NADH dehydrogenase I, chain L) (NDH-1, chain L) (EC:1.6.99.5 1.6.5.3)
Strongly similar to NAD(P)H:quinone oxidoreductase chain 5 n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWH4_9BACT id=5223700 bin=16ft_combo_ws3_JS1 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_20cm_4_scaffold_956_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8420..9859
DNA (1440bp) protein (480aa)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDL8_CONWI
Proton-translocating NADH-quinone oxidoreductase, chain M {ECO:0000313|EMBL:ADB49592.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexi
proton-translocating NADH-quinone oxidoreductase subunit M
13_1_20cm_4_scaffold_956_11
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10284..10619)
DNA (336bp) protein (112aa)
id=24650804 bin=uncultivated_archaeon_J07ABHX67 tax=uncultivated_archaeon_J07ABHX67
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
13_1_20cm_4_scaffold_956_12
unknown

Not on your lists

comp(10683..10859)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_4_scaffold_956_13
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11040..13130)
DNA (2091bp) protein (697aa)
MmpL domain-containing protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AY25_FRADG
MmpL domain-containing protein {ECO:0000313|EMBL:AEH08526.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
MmpL domain-containing protein
13_1_20cm_4_scaffold_956_14
unknown

Not on your lists

comp(13239..13388)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_4_scaffold_956_15
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

13545..14240
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B2FAA9
beta-lactamase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
hypothetical protein
13_1_20cm_4_scaffold_956_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

14237..14515
DNA (279bp) protein (93aa)
Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_4_scaffold_956_17
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

14512..15228
DNA (717bp) protein (239aa)
Major pilin protein fimA n=1 Tax=Exiguobacterium sp. MH3 RepID=U6BH40_9BACL
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
major pilin protein fimA
13_1_20cm_4_scaffold_956_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15225..15878
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037E68FC
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_956_19
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15847..16497)
DNA (651bp) protein (217aa)
Polysaccharide deacetylase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SFH8_INTC7
Polysaccharide deacetylase {ECO:0000313|EMBL:EWT02470.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2
polysaccharide deacetylase
13_1_20cm_4_scaffold_956_20
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16494..18260)
DNA (1767bp) protein (589aa)
sodium:proton antiporter n=1 Tax=Curtobacterium sp. B8 RepID=UPI00034B467E
Sodium:proton antiporter {ECO:0000313|EMBL:EYT57361.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-A
hypothetical protein
13_1_20cm_4_scaffold_956_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18257..19165)
DNA (909bp) protein (303aa)
ATP dependent DNA ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NN0_SOLUE
ATP dependent DNA ligase {ECO:0000313|EMBL:ABJ88740.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitat
ATP dependent DNA ligase
13_1_20cm_4_scaffold_956_22
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19138..20484)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTD1_9RHIZ
Putative uncharacterized protein Tax=S_Thermoanaerobacterales_50_218
hypothetical protein
13_1_20cm_4_scaffold_956_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20477..20782)
DNA (306bp) protein (102aa)
PF06245 family protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YM83_9FIRM
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
Displaying 23 items

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