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13_1_20cm_4_scaffold_12909

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_12909_1
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..345
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZPI4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN81015.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminol
metallophosphoesterase
13_1_20cm_4_scaffold_12909_2
unknown

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342..443
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_20cm_4_scaffold_12909_3
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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459..1208
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein Acry_2907 n=3 Tax=Acidiphilium RepID=A5G2L5_ACICJ rbh
Probable transcriptional regulatory protein APM_2619 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidip
hypothetical protein
13_1_20cm_4_scaffold_12909_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1325..1849
DNA (525bp) protein (175aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z467_AZOL4
ruvC; Holliday junction resolvase RuvC
13_1_20cm_4_scaffold_12909_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1846..2349
DNA (504bp) protein (168aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AM19_AZOBR
ruvA; Holliday junction DNA helicase ruvA
13_1_20cm_4_scaffold_12909_6
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2346..3173
DNA (828bp) protein (276aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteri
Holliday junction DNA helicase RuvB n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B61C1C
ruvB; Holliday junction ATP-dependent DNA helicase RuvB
13_1_20cm_4_scaffold_12909_7
GWF2_Alphaproteobacteria_58_20_curated, Alphaproteobacteria, Proteobacteria, Bacteria

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3269..3697
DNA (429bp) protein (143aa)
thioesterase family protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=GWF2_Alphaproteobacteria_58_20_curated
Thioesterase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IBN6_9PROT
small, thioesterase-like enzyme subunit
13_1_20cm_4_scaffold_12909_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3740..4462
DNA (723bp) protein (241aa)
Biopolymer transport protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2IXE3_9PROT rbh
Biopolymer transport protein {ECO:0000313|EMBL:EKE67317.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceaniba
tolQ; TolQ protein
13_1_20cm_4_scaffold_12909_9
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4465..4956
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00038149D2
Biopolymer transporter ExbD {ECO:0000313|EMBL:KJV08743.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litorali
TolR; TolR protein
13_1_20cm_4_scaffold_12909_10
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4976..6049
DNA (1074bp) protein (358aa)
Protein TonB, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITI0_RHOCS
Protein TonB, putative {ECO:0000313|EMBL:ACI99198.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum
tonB; protein TonB
13_1_20cm_4_scaffold_12909_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6046..7275
DNA (1230bp) protein (410aa)
Protein TolB n=1 Tax=Oceanibaculum indicum P24 RepID=K2IY00_9PROT
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="O
tolB; periplasmic protein of the Tol-Pal system
13_1_20cm_4_scaffold_12909_12
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7339..7830
DNA (492bp) protein (164aa)
Outer membrane lipoprotein omp16 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITH8_RHOCS
Outer membrane lipoprotein omp16 {ECO:0000313|EMBL:ACI99196.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhod
omp16; outer membrane lipoprotein omp16
13_1_20cm_4_scaffold_12909_13
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8002..9027
DNA (1026bp) protein (342aa)
TPR repeat containing exported protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H1C0_9PROT
TPR repeat containing exported protein {ECO:0000313|EMBL:EKV31362.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" sourc
hypothetical protein
13_1_20cm_4_scaffold_12909_14
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9069..9869
DNA (801bp) protein (267aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tilS; tRNA(Ile)-lysidine synthetase, TilS (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITH6_RHOCS
Displaying 14 items

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