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13_1_20cm_4_scaffold_2342

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2342_1
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..282
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BT47_DELAS
Uncharacterized protein {ECO:0000313|EMBL:EZP48929.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein
13_1_20cm_4_scaffold_2342_2
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

458..904
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Asaia sp. SF2.1 RepID=V8A6Y3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN54174.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoeni
hypothetical protein
13_1_20cm_4_scaffold_2342_3
unknown

Not on your lists

977..1291
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_20cm_4_scaffold_2342_4
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1299..1547)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3VVZ1_9RHOB
Sulfur carrier protein ThiS {ECO:0000313|EMBL:KDB03855.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimon
hypothetical protein
13_1_20cm_4_scaffold_2342_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1593..2282)
DNA (690bp) protein (230aa)
oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037672F0
Oxidoreductase {ECO:0000313|EMBL:KJC38036.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885
molybdopterin binding domain-containing protein
13_1_20cm_4_scaffold_2342_6

Not on your lists

comp(2279..3034)
DNA (756bp) protein (252aa)
oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037672F0
Uncharacterized protein {ECO:0000313|EMBL:KKO06964.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_1_20cm_4_scaffold_2342_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3683..5974)
DNA (2292bp) protein (764aa)
General L-amino acid transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HND2_9BRAD rbh
Oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
oxidoreductase
13_1_20cm_4_scaffold_2342_8
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6198..6527)
DNA (330bp) protein (110aa)
Carbon-monoxide dehydrogenase small subunit n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E760_9SPHN
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:EHJ62887.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
ferredoxin
13_1_20cm_4_scaffold_2342_9
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6551..7423)
DNA (873bp) protein (291aa)
oxidoreductase n=1 Tax=Rhizobium loti RepID=UPI000366D93E
Oxidoreductase {ECO:0000313|EMBL:KHK91203.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium mala
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_1_20cm_4_scaffold_2342_10
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7606..8322)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003738793
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EHL20444.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
cyclic nucleotide-binding protein
13_1_20cm_4_scaffold_2342_11
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9030..12059)
DNA (3030bp) protein (1010aa)
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor {ECO:0000313|EMBL:ACB94357.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ACB94357.1};; EC=3.1.1.61 {ECO:0000313|EMBL:ACB94357.1};; TaxID=395963
MCP methyltransferase/methylesterase (EC:2.1.1.80 3.1.1.61)
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IGH5_BEII9
13_1_20cm_4_scaffold_2342_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12226..13176)
DNA (951bp) protein (317aa)
Protein-glutamate methylesterase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZG0_AZOBR
Protein-glutamate methylesterase {ECO:0000313|EMBL:CCD03319.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azosp
protein-glutamate methylesterase
13_1_20cm_4_scaffold_2342_13
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13329..13748
DNA (420bp) protein (140aa)
Protein chain release factor B n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z010_9RHIZ
Peptide chain release factor I {ECO:0000313|EMBL:KFG68394.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga ae
protein chain release factor B
13_1_20cm_4_scaffold_2342_14
unknown

Not on your lists

comp(13766..13987)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_4_scaffold_2342_15
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14113..14481)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B44990
Uncharacterized protein {ECO:0000313|EMBL:KJB90302.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
conserved protein of unknown function; coiled-coil domain
13_1_20cm_4_scaffold_2342_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14657..15391
DNA (735bp) protein (245aa)
Two-component cell cycle transcriptional regulator ctrA n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANN4_AZOBR
Chemotaxis protein CheY {ECO:0000313|EMBL:AIB14686.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasi
chemotaxis protein CheY
13_1_20cm_4_scaffold_2342_17
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15400..16014)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000365B048
Uncharacterized protein {ECO:0000313|EMBL:KJB93938.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
hypothetical protein
13_1_20cm_4_scaffold_2342_18
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16077..16712)
DNA (636bp) protein (212aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HA
molybdopterin-guanine dinucleotide biosynthesis protein A n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B3BFE8
molybdopterin-guanine dinucleotide biosynthesis protein A
13_1_20cm_4_scaffold_2342_19
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16709..17608)
DNA (900bp) protein (300aa)
Putative formate dehydrogenase accessory protein FdhD-like n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJK0_AZOBR rbh
Protein FdhD homolog {ECO:0000256|SAAS:SAAS00093832}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum br
putative formate dehydrogenase accessory protein FdhD-like
13_1_20cm_4_scaffold_2342_20
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17689..18195
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMD5_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:CCC98397.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
hypothetical protein
13_1_20cm_4_scaffold_2342_21
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18259..19251
DNA (993bp) protein (331aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012
Cyclic pyranopterin monophosphate synthase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFT0_AZOBR rbh
moaA; molybdenum cofactor biosynthesis protein A
13_1_20cm_4_scaffold_2342_22
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19248..20036
DNA (789bp) protein (263aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H0E7_9PROT rbh
13_1_20cm_4_scaffold_2342_23
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20080..20385)
DNA (306bp) protein (102aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Displaying 23 items

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