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13_1_20cm_4_scaffold_4939

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Displaying 9 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4939_1
unknown

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2..397
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_20cm_4_scaffold_4939_2
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(470..1690)
DNA (1221bp) protein (407aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacter
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DLD6_DESVM rbh
Mur ligase middle domain-containing protein
13_1_20cm_4_scaffold_4939_3
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1940..2797)
DNA (858bp) protein (286aa)
Alpha/beta hydrolase fold family protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2H6P6_9DELT
Alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:EGY26430.1}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" s
alpha/beta hydrolase fold protein
13_1_20cm_4_scaffold_4939_4
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2889..3902
DNA (1014bp) protein (338aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Desulfovibrio sp. A2 RepID=G2H6P4_9DELT rbh
13_1_20cm_4_scaffold_4939_5
unknown

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4066..4296
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_4_scaffold_4939_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4664..5557)
DNA (894bp) protein (298aa)
Redox-sensitive transcriptional activator n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TY54_9PROT rbh
Redox-sensitive transcriptional activator {ECO:0000313|EMBL:CAM75561.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" so
putative transcriptional regulatory protein, LysR family
13_1_20cm_4_scaffold_4939_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5601..6572)
DNA (972bp) protein (324aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirill
Thioredoxin reductase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KMY6_9PROT rbh
thioredoxin reductase
13_1_20cm_4_scaffold_4939_8
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6762..8711
DNA (1950bp) protein (650aa)
guanylate cyclase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00035C2261 rbh
Adenylate/guanylate cyclase with TPR repeats {ECO:0000313|EMBL:ACA17243.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" s
TPR repeat-containing adenylate/guanylate cyclase
13_1_20cm_4_scaffold_4939_9

Not on your lists

comp(8725..9132)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QS06_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10028.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying 9 items

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