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13_1_20cm_4_scaffold_683

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_683_1
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..622)
DNA (621bp) protein (207aa)
Lipid-A-disaccharide synthase {ECO:0000255|HAMAP-Rule:MF_00392}; EC=2.4.1.182 {ECO:0000255|HAMAP-Rule:MF_00392};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=LPXB_RHOCS
13_1_20cm_4_scaffold_683_2
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(647..1477)
DNA (831bp) protein (277aa)
UDP-2,3-diacylglucosamine pyrophosphatase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HKC4_9PROT rbh
UDP-2,3-diacylglucosamine pyrophosphatase {ECO:0000313|EMBL:KJS39565.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospiri
Conserved protein of unknown function
13_1_20cm_4_scaffold_683_3
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1467..2267)
DNA (801bp) protein (267aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4M3_AZOL4 rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
lpxA; UDP-N-acetylglucosamine acyltransferase
13_1_20cm_4_scaffold_683_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2275..2748)
DNA (474bp) protein (158aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4M2_AZOL4
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
13_1_20cm_4_scaffold_683_5
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2745..3767)
DNA (1023bp) protein (341aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodos
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z8Y9_9PROT rbh
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
13_1_20cm_4_scaffold_683_6
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3790..4467)
DNA (678bp) protein (226aa)
Outer membrane protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NV26_AZOS1
Membrane protein {ECO:0000313|EMBL:KJR64719.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilu
outer membrane protein
13_1_20cm_4_scaffold_683_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4467..6710)
DNA (2244bp) protein (748aa)
Outer membrane protein assembly factor BamA n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKY5_AZOBR rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; R
outer membrane protein
13_1_20cm_4_scaffold_683_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6986..7822)
DNA (837bp) protein (279aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031, ECO:0000313|EMBL:CCC97896.1}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031, ECO:0000313|EMBL:CCC97896.1};; TaxID=1064539 species="Bacteria; Proteobac
Zinc metalloprotease n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKY4_AZOBR
zinc metalloprotease
13_1_20cm_4_scaffold_683_9
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7838..9085)
DNA (1248bp) protein (416aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4L9_AZOL4 rbh
13_1_20cm_4_scaffold_683_10
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9076..9834)
DNA (759bp) protein (253aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales
Phosphatidate cytidylyltransferase n=2 Tax=Rhodospirillum rubrum RepID=G2T8B8_RHORU
phosphatidate cytidylyltransferase
13_1_20cm_4_scaffold_683_11
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9875..10606)
DNA (732bp) protein (244aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospi
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S9Y1_PHAFV rbh
13_1_20cm_4_scaffold_683_12
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10606..11166)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Oceanibaculum indicum P24 RepID=K2KDB1_9PROT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1207063 species="Bacteria;
Ribosome recycling factor
13_1_20cm_4_scaffold_683_13
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11220..11960)
DNA (741bp) protein (247aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISU9_RHOCS
13_1_20cm_4_scaffold_683_14
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12061..12987)
DNA (927bp) protein (309aa)
Elongation factor Ts n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=EFTS_RHOCS rbh
Elongation factor Ts {ECO:0000255|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_00050};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospir
tsf; elongation factor Ts
13_1_20cm_4_scaffold_683_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13039..13884)
DNA (846bp) protein (282aa)
30S ribosomal protein S2 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z647_AZOL4 rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum
30S ribosomal protein S2
13_1_20cm_4_scaffold_683_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14130..14453
DNA (324bp) protein (108aa)
NIPSNAP family containing protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B65934
NIPSNAP family containing protein {ECO:0000313|EMBL:ETW97806.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp.
NIPSNAP family containing protein
13_1_20cm_4_scaffold_683_17
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14511..18002)
DNA (3492bp) protein (1164aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodos
dnaE; DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Oceanibaculum indicum P24 RepID=K2JY99_9PROT rbh
13_1_20cm_4_scaffold_683_18
unknown

Not on your lists

comp(18158..18592)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_4_scaffold_683_19
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18625..19314)
DNA (690bp) protein (230aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobact
lolD1; Lipoprotein-releasing system ATP-binding protein lolD 1 (EC:3.6.3.-)
Peptide ABC transporter ATPase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AGV3_9PROT
13_1_20cm_4_scaffold_683_20
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19311..20558)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000373B717 rbh
lolC; Lipoprotein ABC transporter; permease component LolC; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
lolE; lipoprotein-releasing system permease
13_1_20cm_4_scaffold_683_21
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20555..21874)
DNA (1320bp) protein (440aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00010700}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
Proline--tRNA ligase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y157_9PROT rbh
proS; prolyl-tRNA synthetase
13_1_20cm_4_scaffold_683_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22257..23432
DNA (1176bp) protein (392aa)
serine--glyoxylate transaminase (EC:2.6.1.45); K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] Tax=RIFCSPHIGHO2_1
serine--glyoxylate transaminase (EC:2.6.1.45)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036A611F rbh
13_1_20cm_4_scaffold_683_23
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23528..23797
DNA (270bp) protein (90aa)
50S ribosomal protein L31 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JKE7_9PROT
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; O
50S ribosomal protein L31
Displaying 23 items

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