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13_1_20cm_4_scaffold_2950

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2950_1
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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143..511
DNA (369bp) protein (123aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_20cm_4_scaffold_2950_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(517..1563)
DNA (1047bp) protein (349aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8M2_SPHTD rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ACZ40165.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sph
alcohol dehydrogenase GroES domain-containing protein
13_1_20cm_4_scaffold_2950_3
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(1566..3341)
DNA (1776bp) protein (592aa)
Peptidase M28 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7C2_SPHTD rbh
peptidase M28 Tax=RBG_16_Armatimonadetes_67_12_curated
peptidase M28
13_1_20cm_4_scaffold_2950_4

Not on your lists

comp(3369..4547)
DNA (1179bp) protein (393aa)
Amidohydrolase n=1 Tax=halophilic archaeon DL31 RepID=G2MJI9_9ARCH rbh
Amidohydrolase {ECO:0000313|EMBL:AEN04890.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
amidohydrolase
13_1_20cm_4_scaffold_2950_5
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(4555..6315)
DNA (1761bp) protein (587aa)
Peptidase M28 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7C2_SPHTD
Peptidase M28 {ECO:0000313|EMBL:ACZ39768.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaero
peptidase M28
13_1_20cm_4_scaffold_2950_6

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comp(6317..7714)
DNA (1398bp) protein (466aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEN06947.1}; EC=3.6.3.24 {ECO:0000313|EMBL:AEN06947.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MN18_9ARCH
13_1_20cm_4_scaffold_2950_7
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(7711..8769)
DNA (1059bp) protein (353aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Oligopeptide/dipeptide ABC transporter, ATPase subunit id=24590298 bin=RBG_19FT_COMBO_GAL15_69_19 species=Halomonas sp. GFAJ-1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate rbh
(GlcNAc)2 ABC transporter ATP-binding component 1
13_1_20cm_4_scaffold_2950_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(8777..9700)
DNA (924bp) protein (308aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; K02034 peptide/nickel transport system permease protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; K02034 peptide/nickel transport system permease protein id=24590299 bin=RBG_19FT_COMBO_GAL15_69_19 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
appC; Oligopeptide transport system permease protein AppC
13_1_20cm_4_scaffold_2950_9
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9687..10394)
DNA (708bp) protein (236aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5Z4_KETVY rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADO44388.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
dipeptide/oligopeptide/nickel ABC transporter permease
13_1_20cm_4_scaffold_2950_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(10403..10546)
DNA (144bp) protein (48aa)
hypothetical protein n=1 Tax=Paenisporosarcina sp. TG20 RepID=UPI000309C3D0
dipeptide/oligopeptide/nickel ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
dppB; Dipeptide transport system permease protein DppB
13_1_20cm_4_scaffold_2950_11
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10658..12328)
DNA (1671bp) protein (557aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Rhizobium sp. CF080 RepID=J2TJ56_9RHIZ rbh
Oligopeptide ABC transporter, oligopeptide-binding protein {ECO:0000313|EMBL:CDN57519.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobac
Oligopeptide ABC transporter, oligopeptide-binding protein
13_1_20cm_4_scaffold_2950_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(12452..13207)
DNA (756bp) protein (252aa)
Asp/Glu racemase; K01797 [EC:5.1.99.-] id=24590304 bin=RBG_19FT_COMBO_GAL15_69_19 species=Amycolatopsis methanolica genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate rbh
Hydantoin racemase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Asp/Glu racemase
13_1_20cm_4_scaffold_2950_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13311..14594)
DNA (1284bp) protein (428aa)
General substrate transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQ97_NITHX
General substrate transporter {ECO:0000313|EMBL:ABE61600.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
general substrate transporter
13_1_20cm_4_scaffold_2950_14
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(14677..15360)
DNA (684bp) protein (228aa)
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III; K10773 endonuclease III [EC:4.2.99.18] Tax=CSP1_3_Armatimonadetes
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III; K10773 endonuclease III [EC:4.2.99.18] id=14632600 bin=bin9_gal15 species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin9_gal15 organism_group=GAL15
nth; endonuclease III (EC:4.2.99.18)
Displaying 14 items

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