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13_1_20cm_4_scaffold_2538

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2538_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3..389)
DNA (387bp) protein (129aa)
pth; aminoacyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pth; aminoacyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBE1_9BACT
13_1_20cm_4_scaffold_2538_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


comp(392..1237)
DNA (846bp) protein (282aa)
50S ribosomal protein L25 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBE0_9BACT
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rplY; 50S ribosomal protein L25
13_1_20cm_4_scaffold_2538_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1358..2299)
DNA (942bp) protein (314aa)
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD9_9BACT
13_1_20cm_4_scaffold_2538_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2457..3218)
DNA (762bp) protein (254aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD8_9BACT
13_1_20cm_4_scaffold_2538_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3308..4684)
DNA (1377bp) protein (459aa)
Transcriptional regulatory protein pilR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD7_9BACT rbh
Transcriptional regulatory protein pilR {ECO:0000313|EMBL:CBK40546.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.
pilR; transcriptional regulatory protein pilR
13_1_20cm_4_scaffold_2538_6
unknown

Not on your lists

5209..6183
DNA (975bp) protein (325aa)

This feature has no annotations

13_1_20cm_4_scaffold_2538_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6359..7186)
DNA (828bp) protein (276aa)
Type IV pilus biogenesis protein PilC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD5_9BACT
pilC; type IV pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pilC; type IV pilus biogenesis protein PilC
13_1_20cm_4_scaffold_2538_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7197..7448)
DNA (252bp) protein (84aa)
Type IV pilus biogenesis protein PilC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD5_9BACT
Type IV pilus biogenesis protein PilC {ECO:0000313|EMBL:CBK40544.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
pilC; type IV pilus biogenesis protein PilC
13_1_20cm_4_scaffold_2538_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7646..8182)
DNA (537bp) protein (179aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPLOWO2_02_FULL_Ni
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD3_9BACT
13_1_20cm_4_scaffold_2538_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8290..8682
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_4_scaffold_2538_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8839..9978)
DNA (1140bp) protein (380aa)
Putative Esterase, beta-lactamase family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD1_9BACT rbh
putative esterase, beta-lactamase family Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative esterase, beta-lactamase family
13_1_20cm_4_scaffold_2538_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10214..10720)
DNA (507bp) protein (169aa)
Putative Cell division protein DivIVA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD0_9BACT
Putative Cell division protein DivIVA {ECO:0000313|EMBL:CBK40539.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
putative cell division protein DivIVA
13_1_20cm_4_scaffold_2538_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10733..11029)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC9_9BACT
hypothetical protein; K02221 YggT family protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_4_scaffold_2538_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11029..11829)
DNA (801bp) protein (267aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC8_9BACT rbh
13_1_20cm_4_scaffold_2538_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11914..12642)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC7_9BACT
yggS; hypothetical protein; K06997 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
yggS; hypothetical protein
13_1_20cm_4_scaffold_2538_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(12727..13449)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC6_9BACT
hypothetical protein; K05810 conserved hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_4_scaffold_2538_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13495..14184)
DNA (690bp) protein (230aa)
Cell division protein FtsZ n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC5_9BACT
ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ftsZ; cell division protein FtsZ
Displaying 17 items

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