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13_1_20cm_4_scaffold_4633

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Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4633_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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1..726
DNA (726bp) protein (242aa)
Tyrosine recombinase XerD n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AN46_PELPD
tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tyrosine recombinase XerD
13_1_20cm_4_scaffold_4633_trna_1
unknown

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825..897
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_4633_trna_2
unknown

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989..1064
DNA (76bp)
transferRNA
13_1_20cm_4_scaffold_4633_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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1305..2027
DNA (723bp) protein (241aa)
Protein TolQ n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIG3_9BACT
tolQ; protein TolQ; K03562 biopolymer transport protein TolQ Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tolQ; protein TolQ
13_1_20cm_4_scaffold_4633_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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2024..2476
DNA (453bp) protein (151aa)
Protein TolR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIG2_9BACT
tolR; protein TolR; K03560 biopolymer transport protein TolR Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tolR; protein TolR
13_1_20cm_4_scaffold_4633_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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2504..3532
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VSQ7_9BACT
TonB family protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative protein TolA
13_1_20cm_4_scaffold_4633_5

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3529..4854
DNA (1326bp) protein (442aa)
TolB protein, periplasmic protein involved in the tonb-independent uptake of group A colicins n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VXH2_9BACT rbh
TolB protein, periplasmic protein involved in the tonb-independent uptake of group A colicins {ECO:0000313|EMBL:AGC72141.1}; TaxID=1256584 species="Bacteria; environmental samples.;" source="unculture
tolB; protein TolB
13_1_20cm_4_scaffold_4633_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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4937..5560
DNA (624bp) protein (208aa)
Peptidoglycan-associated lipoprotein Pal (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIF9_9BACT
pal; peptidoglycan-associated lipoprotein pal; K03640 peptidoglycan-associated lipoprotein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pal; peptidoglycan-associated lipoprotein pal
13_1_20cm_4_scaffold_4633_7

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5600..6772
DNA (1173bp) protein (391aa)
TPR repeat containing exported protein putative periplasmic protein contains a protein prenylyltransferase domain n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VWZ7_9BACT
TPR repeat containing exported protein putative periplasmic protein contains a protein prenylyltransferase domain {ECO:0000313|EMBL:AGC72139.1}; TaxID=1256584 species="Bacteria; environmental samples.
putative tol-Pal system protein YbgF
13_1_20cm_4_scaffold_4633_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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6778..7602
DNA (825bp) protein (275aa)
Putative Tol-Pal system protein YbgF n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIF7_9BACT
putative tol-Pal system protein YbgF Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative tol-Pal system protein YbgF
13_1_20cm_4_scaffold_4633_9

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7759..9240
DNA (1482bp) protein (494aa)
DNA mismatch repair protein MutL n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VSQ3_9BACT rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1256584 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_560.;
mutL; DNA mismatch repair protein MutL
Displaying 11 items

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