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13_1_20cm_4_scaffold_5292

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_5292_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2..538)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS1_9BACT
hypothetical protein; K08999 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_4_scaffold_5292_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(577..1029)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS0_9BACT
hypothetical protein; K08999 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_4_scaffold_5292_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1170..1868)
DNA (699bp) protein (233aa)
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
short-chain dehydrogenase/reductase SDR id=14430161 bin=bin3_NC10 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
short-chain dehydrogenase
13_1_20cm_4_scaffold_5292_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2014..2301)
DNA (288bp) protein (96aa)
Putative Fe(2+)-trafficking protein YggX n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR9_9BACT
putative fe(2+)-trafficking protein YggX Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative fe(2+)-trafficking protein YggX
13_1_20cm_4_scaffold_5292_5
unknown

Not on your lists

comp(2512..2787)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_20cm_4_scaffold_5292_trna_1
unknown

Not on your lists

2941..3024
DNA (84bp)
transferRNA
13_1_20cm_4_scaffold_5292_6
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

3314..4039
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR8_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_20cm_4_scaffold_5292_7
unknown

Not on your lists

comp(4228..4530)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_20cm_4_scaffold_5292_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4545..5231)
DNA (687bp) protein (229aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7UK19_DESML
tetrapyrrole (corrin/porphyrin) methylase family protein
13_1_20cm_4_scaffold_5292_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5403..5750
DNA (348bp) protein (116aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
NUDIX hydrolase (Modular protein) id=1969969 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NUDIX hydrolase
13_1_20cm_4_scaffold_5292_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5846..6649
DNA (804bp) protein (268aa)
Putative Cytochrome c biogenesis protein CcsA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR5_9BACT rbh
putative cytochrome c biogenesis protein CcsA Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative cytochrome c biogenesis protein CcsA
13_1_20cm_4_scaffold_5292_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6670..7932
DNA (1263bp) protein (421aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR4_9BACT
13_1_20cm_4_scaffold_5292_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

7968..8291
DNA (324bp) protein (108aa)
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
13_1_20cm_4_scaffold_5292_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8294..9241
DNA (948bp) protein (316aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR3_9BACT rbh
13_1_20cm_4_scaffold_5292_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9250..10653
DNA (1404bp) protein (468aa)
Porphyrin biosynthesis protein HemD {ECO:0000313|EMBL:CBK42449.1}; EC=2.1.1.107 {ECO:0000313|EMBL:CBK42449.1};; EC=4.2.1.75 {ECO:0000313|EMBL:CBK42449.1};; TaxID=330214 species="Bacteria; Nitrospirae;
hemD; porphyrin biosynthesis protein HemD (EC:2.1.1.107 4.2.1.75)
Porphyrin biosynthesis protein HemD n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR2_9BACT rbh
Displaying 15 items

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