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13_1_20cm_4_scaffold_170_curated

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_170_curated_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..716)
DNA (714bp) protein (238aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_170_curated_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

827..1570
DNA (744bp) protein (248aa)
Transcriptional regulator, TrmB n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TB62_ACIB4
transcriptional regulator, TrmB
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_170_curated_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

1580..2788
DNA (1209bp) protein (403aa)
Geranylgeranyl reductase n=1 Tax=mine drainage metagenome RepID=T1A8J4_9ZZZZ
geranylgeranyl reductase family protein
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_4_scaffold_170_curated_4
unknown

Not on your lists

comp(2816..3619)
DNA (804bp) protein (268aa)

This feature has no annotations

13_1_20cm_4_scaffold_170_curated_5
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(3847..4521)
DNA (675bp) protein (225aa)
hypothetical protein id=14632957 bin=bin9_gal15 species=Deinococcus apachensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
Tax=CSP1_3_Armatimonadetes
13_1_20cm_4_scaffold_170_curated_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4780..6003)
DNA (1224bp) protein (408aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDA9_ACIB4
RNA-metabolising metallo-beta-lactamase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_170_curated_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6031..7128)
DNA (1098bp) protein (366aa)
2,3-di-O-geranylgeranylglyceryl phosphate reductase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CW88_METMJ
geranylgeranyl reductase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_170_curated_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(7141..8115)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360C7AE
Geranylgeranyl pyrophosphate synthase
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_170_curated_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(8233..9543)
DNA (1311bp) protein (437aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_170_curated_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9747..11012
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381145C
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_170_curated_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11057..11464
DNA (408bp) protein (136aa)
Thioredoxin 1 n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9C7_9ARCH
putative thioredoxin (modular protein)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_170_curated_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11467..12342)
DNA (876bp) protein (292aa)
Iron-sulfur cluster assembly/repair protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWF2_SYNAS
iron-sulfur cluster assembly/repair protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_170_curated_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(12400..13086)
DNA (687bp) protein (229aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_170_curated_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(13339..13650)
DNA (312bp) protein (104aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_4_scaffold_170_curated_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

13840..15234
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036E07C3
NADP-dependent malic enzyme
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_170_curated_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

15330..15542
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1R7_NITHN
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_170_curated_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(15529..16653)
DNA (1125bp) protein (375aa)
dinP; DNA polymerase IV (archaeal DinB-like DNA polymerase) (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7J933_METBM
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_170_curated_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16728..18308)
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003807592
fpoN; F420H2 dehydrogenase subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_170_curated_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(18310..19719)
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037678B4
NADH-ubiquinone oxidoreductase chain M
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_170_curated_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(19720..21321)
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037678B4
NADH-ubiquinone oxidoreductase chain M
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_170_curated_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(21318..23426)
DNA (2109bp) protein (703aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003726D78
NADH-ubiquinone oxidoreductase chain L
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_170_curated_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(23430..23732)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000368E3B2
F420H2 dehydrogenase subunit K
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_170_curated_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(23729..23992)
DNA (264bp) protein (88aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_170_curated_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(23989..24234)
DNA (246bp) protein (82aa)
NADH:ubiquinone oxidoreductase subunit 6 (Chain J) n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YJC1_9EURY
NADH:ubiquinone oxidoreductase subunit 6 (chain J)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_170_curated_25
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(24316..25599)
DNA (1284bp) protein (428aa)
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit H n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T4D3_9EURY
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_170_curated_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(25596..26690)
DNA (1095bp) protein (365aa)
NADH dehydrogenase I subunit D n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T502_9EURY
NADH dehydrogenase I subunit D
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_170_curated_27
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(26690..27226)
DNA (537bp) protein (179aa)
NADH (Or F420H2) dehydrogenase, subunit C n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BHH9_9EURY
NADH (or F420H2) dehydrogenase, subunit C
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_170_curated_28
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(27223..27453)
DNA (231bp) protein (77aa)
NADH:ubiquinone oxidoreductase subunit 3 (Chain A) n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7I0_9EURY
NADH:ubiquinone oxidoreductase subunit 3 (chain A)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_170_curated_29
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

27636..28202
DNA (567bp) protein (189aa)
Oxidoreductase, molybdopterin binding n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCE2_9BACT
oxidoreductase, molybdopterin binding
Tax=RBG_16_Euryarchaeota_67_27_curated
Displaying 29 items

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