ggKbase home page

13_1_20cm_4_scaffold_207_curated

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_207_curated_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

2..1138
DNA (1137bp) protein (379aa)
malK1; trehalose/maltose import ATP-binding protein MalK (EC:3.6.3.19)
ATPase RIL n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T943_9EURY
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_207_curated_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(1144..2394)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003674D8D
dihydroorotase, multifunctional complex type
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_207_curated_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(2381..2998)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037BDC51
AMMECR1 domain protein
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_207_curated_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

3160..3693
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360D548
signal transduction protein with CBS domains
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_207_curated_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

3766..4173
DNA (408bp) protein (136aa)
V4R domain protein n=1 Tax=mine drainage metagenome RepID=T0ZKA8_9ZZZZ
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_207_curated_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

4170..4526
DNA (357bp) protein (119aa)
Roadblock/LC7 family protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ29_ARCVS
Roadblock/LC7 family protein
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_207_curated_trna_1
unknown

Not on your lists

4571..4643
DNA (73bp)
transferRNA Val
13_1_20cm_4_scaffold_207_curated_7
unknown

Not on your lists

comp(4655..5008)
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_4_scaffold_207_curated_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5023..5793)
DNA (771bp) protein (257aa)
Putative ICC-like phosphoesterase n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YJX1_9EURY
putative ICC-like phosphoesterase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_207_curated_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5852..7288)
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000368EB44
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_207_curated_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7362..8435
DNA (1074bp) protein (358aa)
Calcium/proton exchanger Cax n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XSD2_9FIRM
calcium/proton exchanger Cax
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_207_curated_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8440..9633
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9U0_9ARCH
MFS transporter family protein
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_207_curated_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(9623..9931)
DNA (309bp) protein (103aa)
Putative uncharacterized protein id=4734543 bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_207_curated_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10074..10709
DNA (636bp) protein (212aa)
ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC:2.1.1.-)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000361254F
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_207_curated_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10684..11202)
DNA (519bp) protein (173aa)
Archaemetzincin n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=AMZA_METKA
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_207_curated_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(11199..12659)
DNA (1461bp) protein (487aa)
tRNA-splicing ligase RtcB n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HM66_ACIS0
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_207_curated_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12985..13851)
DNA (867bp) protein (289aa)
Agmatinase n=1 Tax=mine drainage metagenome RepID=T0YEH6_9ZZZZ
agmatinase
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_207_curated_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(13895..14281)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036320C7
translation initiation factor eIF-5A
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_207_curated_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(14324..15394)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C0B2E
putative NOP5 family protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_207_curated_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(15436..16473)
DNA (1038bp) protein (346aa)
Putative methylthioribose-1-phosphate isomerase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HL00_ACIS0
S-methyl-5-thioribose-1-phosphate isomerase
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_207_curated_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(16484..16714)
DNA (231bp) protein (77aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_207_curated_21
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(16717..16944)
DNA (228bp) protein (76aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_207_curated_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(16992..17300)
DNA (309bp) protein (103aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_207_curated_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(17467..18729)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0B8Z3_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_4_scaffold_207_curated_24
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(18856..19164)
DNA (309bp) protein (103aa)
Putative Cytochrome c oxidase, subunit IV id=4743810 bin=GWC2_Methylomirabilis_70_16 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_207_curated_25
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(19173..19283)
DNA (111bp) protein (37aa)
Heme/copper-type cytochrome/quinol oxidase, subunit 3 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNK7_SINAD
heme/copper-type cytochrome/quinol oxidase, subunit 3
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 26 items

View Taxonomy