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13_1_20cm_4_scaffold_387_curated

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_387_curated_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..225)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000372E0F1
putative RNA-binding protein of the translin family
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_387_curated_2
unknown

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332..829
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_20cm_4_scaffold_387_curated_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(826..2199)
DNA (1374bp) protein (458aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003660370
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_387_curated_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2219..2563)
DNA (345bp) protein (115aa)
Lactoylglutathione lyase family protein {ECO:0000313|EMBL:EXG81484.1}; EC=5.1.99.1 {ECO:0000313|EMBL:EXG81484.1};; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Uncharacterized protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X5G5_BACMS
hypothetical protein
13_1_20cm_4_scaffold_387_curated_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(2611..3522)
DNA (912bp) protein (304aa)
Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036CDF9E
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_387_curated_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3693..4220
DNA (528bp) protein (176aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_387_curated_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4255..5280
DNA (1026bp) protein (342aa)
Digeranylgeranylglycerophospholipid reductase 2 n=2 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=GGR2_METKA
dehydrogenase (flavoprotein)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_387_curated_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5341..6288
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037102BE
methylenetetrahydrofolate reductase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_387_curated_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

6367..7902
DNA (1536bp) protein (512aa)
bifunctional purine biosynthesis protein purH (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EL26_9FIRM
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_387_curated_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7912..8553
DNA (642bp) protein (214aa)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2V455_9FIRM
purN; phosphoribosylglycinamide formyltransferase, folate-dependent
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_387_curated_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8944..9441
DNA (498bp) protein (166aa)
GAF domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0G4_THERP
GAF domain-containing protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_387_curated_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(9448..9996)
DNA (549bp) protein (183aa)
Transcriptional regulator, ArsR family n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S382_FERPA
ArsR family transcriptional regulator
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_387_curated_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10012..10278)
DNA (267bp) protein (89aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_387_curated_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10327..11400)
DNA (1074bp) protein (358aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_387_curated_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11529..11762)
DNA (234bp) protein (78aa)
Deoxyribonuclease/rho motif-related TRAM n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T8Q4_METSL
deoxyribonuclease/rho motif-related TRAM
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_387_curated_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(11853..12311)
DNA (459bp) protein (153aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_387_curated_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(12434..12724)
DNA (291bp) protein (97aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_387_curated_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(12828..13475)
DNA (648bp) protein (216aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_387_curated_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


13611..15749
DNA (2139bp) protein (713aa)
Methionine--tRNA ligase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IEB5_ACIB4
methionyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_387_curated_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(15754..16209)
DNA (456bp) protein (152aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_387_curated_21
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

16276..16938
DNA (663bp) protein (221aa)
Putative metal-dependent phosphoesterase, PHP family n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HNB7_ACIS0
putative metal-dependent phosphoesterase, PHP family
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_387_curated_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(16939..17298)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360600D
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_387_curated_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(17377..17784)
DNA (408bp) protein (136aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Euryarchaeota RepID=M9SBQ9_9EURY
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_387_curated_24
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(17781..18254)
DNA (474bp) protein (158aa)
ribC; riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IC31_ACIB4
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_387_curated_25
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18251..18754)
DNA (504bp) protein (168aa)
FAD synthase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HME3_ACIS0
cytidyltransferase-related enzyme
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 25 items

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