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13_1_20cm_4_scaffold_1079

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1079_1
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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1..573
DNA (573bp) protein (191aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
3-methyladenine DNA glycosylase (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I id=3678561 bin=GWC2_Nitrospirae-rel_56_14 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
13_1_20cm_4_scaffold_1079_2
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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702..1046
DNA (345bp) protein (115aa)
ArsR family transcriptional regulator n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B0V7_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:AHG01878.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola l
ArsR family transcriptional regulator
13_1_20cm_4_scaffold_1079_3
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

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1036..1539
DNA (504bp) protein (168aa)
Activator of Hsp90 ATPase 1 family protein Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
Putative glutathione S-transferase-related transmembrane protein id=3237239 bin=GWC2_Nitrospirae_57_13 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Activator of Hsp90 ATPase 1 family protein
13_1_20cm_4_scaffold_1079_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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1620..2609
DNA (990bp) protein (330aa)
metalloendopeptidase glycoprotease family (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=KAE1_CALMQ rbh
metalloendopeptidase glycoprotease family Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_4_scaffold_1079_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2591..3247
DNA (657bp) protein (219aa)
o-sialoglycoprotein endopeptidase; K07174 Mn2+-dependent serine/threonine protein kinase [EC:2.7.1.-] Tax=RBG_13_Bathyarchaeota_38_9_curated
O-sialoglycoprotein endopeptidase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RDC3_9EURY
o-sialoglycoprotein endopeptidase
13_1_20cm_4_scaffold_1079_6
Hyperthermus butylicus, Hyperthermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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3333..3809
DNA (477bp) protein (159aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_01405}; EC=3.6.1.19 {ECO:0000255|HAMAP-Rule:MF_01405};; Non-standard purine NTP pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_01405}; N
putative deoxyribonucleotide triphosphate pyrophosphatase (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=NTPA_HYPBU
13_1_20cm_4_scaffold_1079_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


3875..4453
DNA (579bp) protein (193aa)
rpoE`; DNA-directed RNA polymerase, subunit E` (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T895_9ARCH
13_1_20cm_4_scaffold_1079_8
unknown

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comp(4716..4955)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_20cm_4_scaffold_1079_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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5040..5429
DNA (390bp) protein (130aa)
50S ribosomal protein L7Ae n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=RL7A_HYPBU
50S ribosomal protein L7Ae; K02936 large subunit ribosomal protein L7Ae Tax=RBG_13_Bathyarchaeota_38_9_curated
rpl7ae; 50S ribosomal protein L7Ae
13_1_20cm_4_scaffold_1079_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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5426..5650
DNA (225bp) protein (75aa)
30S ribosomal protein S28e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IIL4_NITGG
30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e Tax=RBG_13_Bathyarchaeota_38_9_curated
rps28e; 30S ribosomal protein S28e
13_1_20cm_4_scaffold_1079_11
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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5816..6274
DNA (459bp) protein (153aa)
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RBG_16_Bathyarchaeota_48_13_curated
nucleoside diphosphate kinase (EC:2.7.4.6)
UPI00034F2333 related cluster n=1 Tax=unknown RepID=UPI00034F2333
13_1_20cm_4_scaffold_1079_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

6354..8132
DNA (1779bp) protein (593aa)
Probable translation initiation factor IF-2 n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=IF2P_IGNH4 rbh
translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor IF-2
13_1_20cm_4_scaffold_1079_13
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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8195..8572
DNA (378bp) protein (126aa)
30S ribosomal protein S6e n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS6E_METKA
RPS6A; 30S ribosomal protein S6; K02991 small subunit ribosomal protein S6e Tax=RBG_16_Bathyarchaeota_48_13_curated
RPS6A; 30S ribosomal protein S6
13_1_20cm_4_scaffold_1079_14
RBG_16_Archaea_50_20_curated, Archaea

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8569..9117
DNA (549bp) protein (183aa)
Ribonuclease, Rne/Rng family n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A2X7_PELCD
30S ribosomal protein S24e; K02974 small subunit ribosomal protein S24e Tax=RBG_16_Archaea_50_20_curated
ribonuclease, Rne/Rng family
13_1_20cm_4_scaffold_1079_15
unknown

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comp(9138..9518)
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_20cm_4_scaffold_1079_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(9457..10521)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RY37_THEPD
GTP binding protein Tax=RBG_16_Archaea_50_20_curated
ychF; translation-associated GTPase
13_1_20cm_4_scaffold_1079_17
RBG_16_Archaea_50_20_curated, Archaea

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comp(10535..11149)
DNA (615bp) protein (205aa)
Predicted dinucleotide-binding enzyme n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYQ9_METKA
dinucleotide-binding protein; K06988 Tax=RBG_16_Archaea_50_20_curated
dinucleotide-binding protein
13_1_20cm_4_scaffold_1079_18
RBG_16_Archaea_50_20_curated, Archaea

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comp(11203..12576)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036E07C3
NADP-dependent malic enzyme Tax=RBG_16_Archaea_50_20_curated
NADP-dependent malic enzyme
13_1_20cm_4_scaffold_1079_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

12796..13194
DNA (399bp) protein (133aa)
50S ribosomal protein L15e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IDZ5_NITGG
50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e Tax=RBG_16_Archaea_50_20_curated
rpl15e; 50S ribosomal protein L15e
13_1_20cm_4_scaffold_1079_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

13236..14246
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZVR1_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_20cm_4_scaffold_1079_21
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(14209..15039)
DNA (831bp) protein (277aa)
Isopentenyl phosphate kinase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7A6_METSW
hypothetical protein; K06981 Tax=RBG_16_Bathyarchaeota_57_9_curated
aspartate/glutamate/uridylate kinase
13_1_20cm_4_scaffold_1079_22
unknown

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15118..15384
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_20cm_4_scaffold_1079_23
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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15384..16124
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1M4_METPS
circadian clock protein KaiC Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_20cm_4_scaffold_1079_24
RBG_16_Archaea_50_20_curated, Archaea

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16124..17095
DNA (972bp) protein (324aa)
Universally conserved protein n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKD6_HYPBU
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
recombinase RecA
13_1_20cm_4_scaffold_1079_25
RBG_16_Archaea_50_20_curated, Archaea

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comp(17101..17865)
DNA (765bp) protein (255aa)
Hypothetical conserved protein n=1 Tax=uncultured crenarchaeote RepID=H5SJ42_9CREN
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
putative circadian clock protein, KaiC
13_1_20cm_4_scaffold_1079_26
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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18017..19027
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH89_NITGG
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_20cm_4_scaffold_1079_27
unknown

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19331..21187
DNA (1857bp) protein (619aa)

This feature has no annotations

13_1_20cm_4_scaffold_1079_28
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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21184..21561
DNA (378bp) protein (126aa)
Marine sediment metagenome DNA, contig: S12H4_L00878 Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_20cm_4_scaffold_1079_29
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(21535..21900)
DNA (366bp) protein (122aa)
peptidyl-tRNA hydrolase; K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Peptidyl-tRNA hydrolase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LL75_THEBM
peptidyl-tRNA hydrolase
13_1_20cm_4_scaffold_1079_30
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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21968..22441
DNA (474bp) protein (158aa)
Putative uncharacterized protein PH1876 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O59544_PYRHO
Putative uncharacterized protein PH1876 {ECO:0000313|EMBL:BAA30998.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horik
hypothetical protein
Displaying items 1-30 of 33 in total

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