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13_1_20cm_4_scaffold_1453

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1453_1

Not on your lists

comp(342..1829)
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C8385
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49274.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative peptidase M20 family protein
13_1_20cm_4_scaffold_1453_2
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1877..3187)
DNA (1311bp) protein (437aa)
sensor histidine kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C53E9
sensory box histidine kinase/response regulator Tax=RBG_16_Deltaproteobacteria_71_12_curated
integral membrane sensor signal transduction histidine kinase
13_1_20cm_4_scaffold_1453_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

3421..4101
DNA (681bp) protein (227aa)
id=14625572 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_20cm_4_scaffold_1453_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4105..4449)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DFD94
thiol-disulfide isomerase-like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
thioredoxin family protein
13_1_20cm_4_scaffold_1453_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4449..5537)
DNA (1089bp) protein (363aa)
Conserved hypothetical secreted protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K1L6_AZOSB
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein
13_1_20cm_4_scaffold_1453_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5589..6479)
DNA (891bp) protein (297aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
Ornithine carbamoyltransferase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDU0_ANADF
ornithine carbamoyltransferase
13_1_20cm_4_scaffold_1453_7
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6476..7909)
DNA (1434bp) protein (478aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q660_9DELT rbh
13_1_20cm_4_scaffold_1453_8
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7906..9111)
DNA (1206bp) protein (402aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PZQ5_9FIRM
13_1_20cm_4_scaffold_1453_9
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9108..9569)
DNA (462bp) protein (154aa)
Arginine repressor n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NX72_9DELT
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cys
arginine repressor ArgR
13_1_20cm_4_scaffold_1453_10
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9566..11500)
DNA (1935bp) protein (645aa)
Arginine biosynthesis bifunctional protein ArgJ/acetylglutamate kinase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P114_9DELT
Arginine biosynthesis protein ArgJ {ECO:0000313|EMBL:KFA94522.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;"
arginine biosynthesis bifunctional protein ArgJ
13_1_20cm_4_scaffold_1453_11
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11497..12549)
DNA (1053bp) protein (351aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P3H8_9DELT
13_1_20cm_4_scaffold_1453_12
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12602..12820)
DNA (219bp) protein (73aa)
Transmembrane protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1GD99_9PSEU
alkylmercury lyase Tax=RBG_16_RIF_CHLX_70_13_curated
transmembrane protein
13_1_20cm_4_scaffold_1453_13
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(12827..13273)
DNA (447bp) protein (149aa)
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein id=14630605 bin=bin9_gal15 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_20cm_4_scaffold_1453_14
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13304..13738)
DNA (435bp) protein (145aa)
Zinc metalloprotease n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZG6_9ACTO
Chitinase {ECO:0000313|EMBL:KJY26725.1}; TaxID=68223 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
zinc metalloprotease
13_1_20cm_4_scaffold_1453_15
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14050..14565
DNA (516bp) protein (172aa)
Transcription elongation factor GreA n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IIL7_ANADE
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=290397 species="Bacteria
greA; transcription elongation factor GreA
13_1_20cm_4_scaffold_1453_16
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14562..16070
DNA (1509bp) protein (503aa)
ATP-dependent DNA helicase RecG n=1 Tax=Geobacter sp. (strain M21) RepID=C6DZ45_GEOSM
ATP-dependent DNA helicase RecG
Tax=BJP_IG2102_Syntrophobacterales_60_12
13_1_20cm_4_scaffold_1453_17
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16067..16960
DNA (894bp) protein (298aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IIL8_ANADE
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:GAO02766.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxoba
13_1_20cm_4_scaffold_1453_18
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16968..17225)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80642.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
13_1_20cm_4_scaffold_1453_19
unknown

Not on your lists

comp(17233..18165)
DNA (933bp) protein (311aa)

This feature has no annotations

13_1_20cm_4_scaffold_1453_20
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18249..19715
DNA (1467bp) protein (489aa)
General secretory system II protein E n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08RH0_STIAD
General secretory system II protein E {ECO:0000313|EMBL:ADO72570.1}; Gspii_e N-terminal domain family {ECO:0000313|EMBL:EAU63081.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria
general secretion system protein E
13_1_20cm_4_scaffold_1453_21
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19712..20263
DNA (552bp) protein (184aa)
hypothetical protein Tax=CG_Desulfob_01
Hypothetical exported protein id=4706703 bin=GWC2_Nitrospirae_57_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
13_1_20cm_4_scaffold_1453_22
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20260..20817
DNA (558bp) protein (186aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBH4_ANADF
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ABS26070.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
CDP-alcohol phosphatidyltransferase
13_1_20cm_4_scaffold_1453_trna_1
unknown

Not on your lists

20856..20927
DNA (72bp)
transferRNA
13_1_20cm_4_scaffold_1453_23
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21038..21328
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCL3_ANASK
Uncharacterized protein {ECO:0000313|EMBL:GAO01725.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
hypothetical protein
13_1_20cm_4_scaffold_1453_24
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21636..22484)
DNA (849bp) protein (283aa)
Putative hydroxylase n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2Q5L8_9PSEU
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KFZ80286.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp.
nucleotide-diphosphate-sugar epimerase/NmrA family protein
13_1_20cm_4_scaffold_1453_25
unknown

Not on your lists

comp(22481..22639)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_20cm_4_scaffold_1453_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22792..23565)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5Q3_SORCE rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP38248.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
hypothetical protein
13_1_20cm_4_scaffold_1453_27
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23636..24610
DNA (975bp) protein (325aa)
Transcriptional regulator, AraC family protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WU62_PSEDE rbh
Transcriptional regulator, AraC family protein {ECO:0000313|EMBL:AGI22711.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" so
Transcriptional regulator, AraC family protein
13_1_20cm_4_scaffold_1453_28
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24736..25152
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E925_GEOLS
hypothetical protein Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
hypothetical protein
13_1_20cm_4_scaffold_1453_29
unknown

Not on your lists

comp(25389..27911)
DNA (2523bp) protein (841aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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