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13_1_20cm_4_scaffold_1587

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1587_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..320)
DNA (318bp) protein (106aa)
ATP-dependent DNA helicase (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA/RNA helicase, superfamily I n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QD54_9FIRM
UvrD-like DNA helicase
13_1_20cm_4_scaffold_1587_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(317..1516)
DNA (1200bp) protein (400aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M6_GEMAT
two-component histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
two-component histidine kinase
13_1_20cm_4_scaffold_1587_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1506..2792)
DNA (1287bp) protein (429aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine--tRNA ligase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDI4_9FIRM
Seryl-tRNA synthetase
13_1_20cm_4_scaffold_1587_4
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(2797..3375)
DNA (579bp) protein (193aa)
Tax=RBG_16_Acidobacteria_68_9_curated
13_1_20cm_4_scaffold_1587_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3470..3823
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M3_GEMAT
hypothetical protein; K07131 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_1587_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3840..4244
DNA (405bp) protein (135aa)
chemotaxis protein CheY n=1 Tax=Caldimonas manganoxidans RepID=UPI0003606529
Two component transcriptional regulator {ECO:0000313|EMBL:EGJ12323.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyt
response regulator receiver
13_1_20cm_4_scaffold_1587_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4241..5251
DNA (1011bp) protein (337aa)
manC; putative mannose-1-phosphate guanylyltransferase (EC:2.7.7.13); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP9_GEMAT
Nucleotidyl transferase
13_1_20cm_4_scaffold_1587_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5248..6417
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type
13_1_20cm_4_scaffold_1587_9
unknown

Not on your lists

7476..8075
DNA (600bp) protein (200aa)

This feature has no annotations

13_1_20cm_4_scaffold_1587_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8091..8480)
DNA (390bp) protein (130aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_1587_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8517..9134)
DNA (618bp) protein (206aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cyclic diguanylate phosphodiesterase id=4963223 bin=GWA2_Deltaproteo_65_63 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
13_1_20cm_4_scaffold_1587_12
unknown

Not on your lists

9220..9612
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_20cm_4_scaffold_1587_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9570..11636)
DNA (2067bp) protein (689aa)
HEAT-like repeat-containing protein n=1 Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39RU0_GEOMG
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
HEAT-like repeat-containing protein
13_1_20cm_4_scaffold_1587_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11798..13438)
DNA (1641bp) protein (547aa)
60 kDa chaperonin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CH60_GEMAT rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=861299 speci
60 kDa chaperonin
13_1_20cm_4_scaffold_1587_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13470..13784)
DNA (315bp) protein (105aa)
10 kDa chaperonin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CH10_GEMAT
groES; 10 kDa chaperonin; K04078 chaperonin GroES Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
groES; 10 kDa chaperonin
13_1_20cm_4_scaffold_1587_16
unknown

Not on your lists

comp(13903..14313)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_20cm_4_scaffold_1587_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14403..15380)
DNA (978bp) protein (326aa)
SH3 domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W240_CLOBI
cell wall-associated hydrolase Tax=RBG_16_Gemmatimonadetes_66_8_curated
NLP/P60 protein
13_1_20cm_4_scaffold_1587_18
unknown

Not on your lists

comp(15364..15648)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_4_scaffold_1587_19
unknown

Not on your lists

comp(15667..16290)
DNA (624bp) protein (208aa)

This feature has no annotations

13_1_20cm_4_scaffold_1587_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16356..17015)
DNA (660bp) protein (220aa)
UbiA prenyltransferase; K04040 chlorophyll synthase [EC:2.5.1.62] Tax=GWC2_Gemmatimonadetes_71_10_curated
UbiA prenyltransferase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3A9_9BACT
UbiA prenyltransferase
13_1_20cm_4_scaffold_1587_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17110..17889)
DNA (780bp) protein (260aa)
putative transcriptional acitvator, Baf family; K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=GWC2_Gemmatimonadetes_71_10_curated
pantothenate kinase n=1 Tax=Meiothermus timidus RepID=UPI000372C9F3
putative Baf family transcriptional acitvator
13_1_20cm_4_scaffold_1587_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18024..18782)
DNA (759bp) protein (253aa)
biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=RBG_16_Gemmatimo
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L6_GEMAT
biotin/acetyl-CoA-carboxylase ligase
13_1_20cm_4_scaffold_1587_23
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18770..19552)
DNA (783bp) protein (261aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYM4_9FIRM
undecaprenol kinase
13_1_20cm_4_scaffold_1587_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19549..20373)
DNA (825bp) protein (275aa)
UbiA prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Prenyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CV32_9EURY
4-hydroxybenzoate polyprenyltransferase-related prenyltransferase
13_1_20cm_4_scaffold_1587_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20366..21493)
DNA (1128bp) protein (376aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L4_GEMAT
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA
13_1_20cm_4_scaffold_1587_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21495..22457)
DNA (963bp) protein (321aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=GWC2_Gemmatimonadetes_71_10_curated
tRNA dimethylallyltransferase
tRNA dimethylallyltransferase 2 id=4849898 bin=GWC2_Methylomirabilis_70_16 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_1587_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22477..24162)
DNA (1686bp) protein (562aa)
DNA mismatch repair protein MutL n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=MUTL_ANADE
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA mismatch repair protein mutL
13_1_20cm_4_scaffold_1587_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24159..26375)
DNA (2217bp) protein (739aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Aerotolerance-related protein BatD
13_1_20cm_4_scaffold_1587_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26372..27886)
DNA (1515bp) protein (505aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L0_GEMAT
hypothetical membrane protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
von Willebrand factor type A
13_1_20cm_4_scaffold_1587_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27886..28767)
DNA (882bp) protein (294aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K9_GEMAT
hypothetical membrane protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
Displaying items 1-30 of 31 in total

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