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13_1_20cm_4_scaffold_162

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_162_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..287)
DNA (285bp) protein (95aa)
histidinol-phosphate phosphatase family protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RBG_16_Euryarchaeota_67_27_curated
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRJ2_9BACT
13_1_20cm_4_scaffold_162_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(373..996)
DNA (624bp) protein (208aa)
O-methyltransferase family protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRI1_9BACT
O-methyltransferase Tax=RBG_16_Euryarchaeota_67_27_curated
O-methyltransferase
13_1_20cm_4_scaffold_162_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1610..2887
DNA (1278bp) protein (426aa)
miaB1; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (EC:2.8.4.3)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003821D54 rbh
2-methylthioadenine synthetase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_162_trna_1
unknown

Not on your lists

2910..2982
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_162_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2988..3245
DNA (258bp) protein (86aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_162_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3178..5133)
DNA (1956bp) protein (652aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EA70C
7-cyano-7-deazaguanine tRNA-ribosyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
7-cyano-7-deazaguanine tRNA-ribosyltransferase
13_1_20cm_4_scaffold_162_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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5228..6013
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQC2_METZD
hypothetical protein; K07502 hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_4_scaffold_162_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6010..6354)
DNA (345bp) protein (115aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
Uncharacterized protein id=4880920 bin=GWC2_Pelobacter_58_13 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_20cm_4_scaffold_162_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6375..6749)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F63A8
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_4_scaffold_162_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6753..7154)
DNA (402bp) protein (134aa)
Two component transcriptional regulator, Fis family n=3 Tax=Anaeromyxobacter RepID=B4UDR6_ANASK
Fis family two component sigma-54 specific transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Fis family transcriptional regulator
13_1_20cm_4_scaffold_162_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(7247..8311)
DNA (1065bp) protein (355aa)
Multi-sensor hybrid histidine kinase n=1 Tax=mine drainage metagenome RepID=T1A238_9ZZZZ
two component sigma54 specific Fis family transcriptional regulator Tax=RBG_16_Euryarchaeota_67_27_curated
Fis family transcriptional regulator
13_1_20cm_4_scaffold_162_11
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8289..11084)
DNA (2796bp) protein (932aa)
Two-component hybrid sensor and regulator n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QCL2_9DELT
multi-sensor hybrid histidine kinase Tax=RBG_16_Spirochaete_67_19_curated
multi-sensor hybrid histidine kinase
13_1_20cm_4_scaffold_162_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(11238..12029)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380433D
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_16_Euryarchaeota_68_13_curated
RecA-superfamily ATPase possibly involved in signal transduction
13_1_20cm_4_scaffold_162_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12065..12682
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICL4_ACIB4
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_162_14
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

12695..13048
DNA (354bp) protein (118aa)
peptidyl-tRNA hydrolase; K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] Tax=RBG_16_Euryarchaeota_68_13_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=2 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=PTH_PYRAB
13_1_20cm_4_scaffold_162_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

13051..13623
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C5D1A
hypothetical protein; K09120 hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_4_scaffold_162_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(13646..14680)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003662022 rbh
putative cell division protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative cell division protein
13_1_20cm_4_scaffold_162_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14746..15078)
DNA (333bp) protein (111aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_4_scaffold_162_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(15242..16474)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DC8F0
translation initiation factor IF-2 subunit gamma Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
protein synthesis factor GTP-binding protein
13_1_20cm_4_scaffold_162_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(16471..16860)
DNA (390bp) protein (130aa)
30S ribosomal protein S6e n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HK77_ACIS0
ribosomal protein S6E (S10) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ribosomal protein S6E (S10)
13_1_20cm_4_scaffold_162_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16997..18214)
DNA (1218bp) protein (406aa)
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Cysteine--tRNA ligase n=1 Tax=Thermococcus sp. AM4 RepID=B7R1M2_9EURY
cysteinyl-tRNA synthetase
13_1_20cm_4_scaffold_162_trna_2
unknown

Not on your lists

18373..18444
DNA (72bp)
transferRNA
13_1_20cm_4_scaffold_162_21
unknown

Not on your lists

18618..18713
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_20cm_4_scaffold_162_22
unknown

Not on your lists

18719..19051
DNA (333bp) protein (111aa)

This feature has no annotations

Displaying 24 items

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