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13_1_20cm_4_scaffold_1682

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1682_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..315)
DNA (315bp) protein (105aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHS3_NOCSJ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABL81358.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (s
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_1682_2
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(322..1494)
DNA (1173bp) protein (391aa)
X-Pro dipeptidase n=1 Tax=Bacillus sp. L1(2012) RepID=UPI000346AEFF rbh
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:AFQ45225.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (st
Xaa-Pro aminopeptidase
13_1_20cm_4_scaffold_1682_3
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1514..2638)
DNA (1125bp) protein (375aa)
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (EC:3.5.1.-)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WFX6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB98190.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
13_1_20cm_4_scaffold_1682_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2735..3685
DNA (951bp) protein (317aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:EFH90074.1}; EC=4.3.1.12 {ECO:0000313|EMBL:EFH90074.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae;
ornithine cyclodeaminase/mu-crystallin (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD23_9CHLR
13_1_20cm_4_scaffold_1682_5
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3690..4667)
DNA (978bp) protein (326aa)
Transketolase central region n=1 Tax=Frankia sp. EUN1f RepID=D3D6K9_9ACTO
Transketolase central region {ECO:0000313|EMBL:EFC81434.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
transketolase
13_1_20cm_4_scaffold_1682_6

Not on your lists

comp(4669..5757)
DNA (1089bp) protein (363aa)
pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=1 Tax=Frankia sp. EUN1f RepID=D3D6L0_9ACTO
Pyruvate dehydrogenase {ECO:0000313|EMBL:KGA21336.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
13_1_20cm_4_scaffold_1682_7
unknown

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comp(5765..6046)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_20cm_4_scaffold_1682_8
Corynebacterium accolens, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6043..6936)
DNA (894bp) protein (298aa)
Protoporphyrinogen oxidase {ECO:0000313|EMBL:EFM44503.1}; EC=1.3.3.4 {ECO:0000313|EMBL:EFM44503.1};; TaxID=862512 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacter
Protoporphyrinogen oxidase n=1 Tax=Corynebacterium sp. KPL1818 RepID=U7LTC7_9CORY
13_1_20cm_4_scaffold_1682_9
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7083..7985
DNA (903bp) protein (301aa)
Inner-membrane translocator n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WKZ7_BURSC
Inner-membrane translocator {ECO:0000313|EMBL:ADG19893.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia s
inner-membrane translocator
13_1_20cm_4_scaffold_1682_10
Beauveria bassiana, Beauveria, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(7997..8566)
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ02267.1}; TaxID=1245745 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordycipitaceae; B
13_1_20cm_4_scaffold_1682_11
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9114..9743
DNA (630bp) protein (210aa)
Sulfate-transporting ATPase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQ00_DESK7
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:AJZ60680.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkh
branched-chain amino acid transport system / permease component family protein
13_1_20cm_4_scaffold_1682_12
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9751..10485
DNA (735bp) protein (245aa)
ABC transporter related n=1 Tax=Burkholderia sp. H160 RepID=B5WAG6_9BURK
ABC transporter family protein {ECO:0000313|EMBL:AJZ59847.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderi
ABC transporter family protein
13_1_20cm_4_scaffold_1682_13
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10449..11672)
DNA (1224bp) protein (408aa)
Extracellular ligand-binding receptor n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WKZ6_BURSC rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADG19892.1}; Flags: Precursor;; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholde
extracellular ligand-binding receptor
13_1_20cm_4_scaffold_1682_14
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11859..13058
DNA (1200bp) protein (400aa)
Glutamate dehydrogenase n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0GZ82_STRA9
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
glutamate dehydrogenase
13_1_20cm_4_scaffold_1682_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13055..13417)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4C1_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB50493.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_4_scaffold_1682_16
Mycobacterium immunogenum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13532..13948
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Segniliparus rugosus ATCC BAA-974 RepID=E5XPQ3_9ACTO
Um strain SMUC14 PROKKA_contig000040, whole genome shotgun sequence {ECO:0000313|EMBL:KIU37860.1}; TaxID=83262 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_1682_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14047..15135
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003610B52
Uncharacterized protein {ECO:0000313|EMBL:ETW94517.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
isomerase/lactonizing enzyme
13_1_20cm_4_scaffold_1682_18
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15145..16404
DNA (1260bp) protein (420aa)
Probable D-amino-acid dehydrogenase {ECO:0000313|EMBL:ABG93148.1}; EC=1.4.99.1 {ECO:0000313|EMBL:ABG93148.1};; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococ
D-amino-acid dehydrogenase (EC:1.4.99.1)
Probable D-amino-acid dehydrogenase n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0SH38_RHOSR
13_1_20cm_4_scaffold_1682_19
Pseudomonas sp. GM78, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16411..17175)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM78 RepID=J3IST9_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJN35093.1}; Flags: Precursor;; TaxID=1144337 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_1682_20
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(17172..17867)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae MGH 48 RepID=V3JJT7_KLEPN
hypothetical protein Tax=RBG_16_Actinobacteria_68_21_curated
Glyoxalase-like domain protein
13_1_20cm_4_scaffold_1682_21
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17901..18545)
DNA (645bp) protein (215aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Frankia sp. EUN1f RepID=D3D6L1_9ACTO
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFC81436.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_1682_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18600..18968
DNA (369bp) protein (123aa)
endoribonuclease L-PSP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Endoribonuclease L-PSP id=4863489 bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
endoribonuclease L-PSP
13_1_20cm_4_scaffold_1682_23
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(18965..19432)
DNA (468bp) protein (156aa)
endoribonuclease L-PSP Tax=CSP1_3_Armatimonadetes
endoribonuclease L-PSP id=14630933 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin9_gal15 organism_group=GAL15
endoribonuclease L-PSP
13_1_20cm_4_scaffold_1682_24
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19631..19963
DNA (333bp) protein (111aa)
Probable Xaa-Pro dipeptidase {ECO:0000313|EMBL:ABH00622.1}; EC=3.4.13.9 {ECO:0000313|EMBL:ABH00622.1};; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;"
Xaa-Pro dipeptidase (EC:3.4.13.9)
Probable Xaa-Pro dipeptidase n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RVR4_RHOSR
Displaying 24 items

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