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13_1_20cm_4_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_172_1
unknown

Not on your lists

comp(1..138)
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_20cm_4_scaffold_172_2
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(315..473)
DNA (159bp) protein (53aa)
Putative uncharacterized protein id=2310167 bin=GWB2_Chloroflexi_54_36 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=BJP_IG2069_Anaerolineales_43_63
13_1_20cm_4_scaffold_172_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

608..1537
DNA (930bp) protein (310aa)
LysR family transcriptional regulator YeiE n=1 Tax=Rhodovulum sp. PH10 RepID=J6LE97_9RHOB
LysR family transcriptional regulator YeiE {ECO:0000313|EMBL:EJW11473.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source=
LysR family transcriptional regulator
13_1_20cm_4_scaffold_172_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(1613..2920)
DNA (1308bp) protein (436aa)
Glycoside hydrolase family 4 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U1L5_9CHLR
Glycoside hydrolase family 4 {ECO:0000313|EMBL:EFH82659.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter
family 4 glycosyl hydrolase
13_1_20cm_4_scaffold_172_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

3104..3901
DNA (798bp) protein (266aa)
Transcriptional regulator, ArsR family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AVY2_HERA2
ArsR family transcriptional regulator Tax=RBG_16_RIF_CHLX_72_14_curated
ArsR family transcriptional regulator
13_1_20cm_4_scaffold_172_6
unknown

Not on your lists

comp(4408..4506)
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_20cm_4_scaffold_172_trna_1
unknown

Not on your lists

comp(5075..5148)
DNA (74bp)
transferRNA
13_1_20cm_4_scaffold_172_7
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5206..5607)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QPY4_RALPI
Glyoxalase {ECO:0000313|EMBL:EYS85400.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
hypothetical protein
13_1_20cm_4_scaffold_172_8
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5709..9731)
DNA (4023bp) protein (1341aa)
putative ATP-dependent helicase (EC:3.6.1.-) Tax=RBG_16_RIF_CHLX_70_13_curated
putative ATP-dependent helicase (EC:3.6.1.-) id=14628638 bin=bin8_Chloro species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
lhr; DEAD/DEAH box helicase domain-containing protein
13_1_20cm_4_scaffold_172_9
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10093..10593
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X0M0_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR50816.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU1
hypothetical protein
13_1_20cm_4_scaffold_172_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(10585..11340)
DNA (756bp) protein (252aa)
Cytochrome c-type biogenesis protein CcdA n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E568_9RHOB
ccdA; cytochrome c biogenesis protein CcdA Tax=RBG_16_Chloroflexi_63_12_curated
cytochrome C biogenesis protein transmembrane region
13_1_20cm_4_scaffold_172_11
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11334..12173)
DNA (840bp) protein (280aa)
Lipase/esterase n=1 Tax=Streptomyces sp. AA4 RepID=D9VB17_9ACTO
Lipase/esterase {ECO:0000313|EMBL:EFL09866.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
alpha/beta hydrolase
13_1_20cm_4_scaffold_172_12
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

12188..14062
DNA (1875bp) protein (625aa)
pepF; oligopeptidase F; K08602 oligoendopeptidase F [EC:3.4.24.-] Tax=RBG_16_KB1_OP1_55_9_curated
Oligopeptidase F n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9W7_CALAS
pepF; oligopeptidase F
13_1_20cm_4_scaffold_172_13
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14045..14515)
DNA (471bp) protein (157aa)
putative acetyltransferase (EC:2.3.1.-)
Putative acetyltransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2H4_ANATU
GNAT family acetyltransferase {ECO:0000313|EMBL:KIE51875.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
13_1_20cm_4_scaffold_172_14
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

14781..17075
DNA (2295bp) protein (765aa)
alpha-mannosidase n=1 Tax=Streptomyces acidiscabies RepID=UPI00028A1B40
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_20cm_4_scaffold_172_15
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17035..18273)
DNA (1239bp) protein (413aa)
MFS transporter n=1 Tax=Salinispora pacifica RepID=UPI000382CE53
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABV96294.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (
major facilitator transporter
13_1_20cm_4_scaffold_172_16
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18270..18569)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037CCA32
Branched-chain amino acid transport {ECO:0000313|EMBL:ABS01696.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (st
branched-chain amino acid transport
13_1_20cm_4_scaffold_172_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18566..19087)
DNA (522bp) protein (174aa)
AzlC family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8R1_NAKMY
AzlC family protein {ECO:0000313|EMBL:ACV79116.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099
AzlC family protein
13_1_20cm_4_scaffold_172_18
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19218..19664)
DNA (447bp) protein (149aa)
Lipoprotein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XR07_9ACTO
Lipoprotein {ECO:0000313|EMBL:EFL40520.1}; TaxID=467200 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
hypothetical protein
13_1_20cm_4_scaffold_172_19
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19701..20819)
DNA (1119bp) protein (373aa)
HNH endonuclease n=1 Tax=Frankia sp. CN3 RepID=G6H5X6_9ACTO
putative HNH endonuclease Tax=RBG_16_Actinobacteria_67_15_curated
HNH endonuclease
13_1_20cm_4_scaffold_172_20
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20879..21646)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR80_RUBXD
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:AHY48031.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
13_1_20cm_4_scaffold_172_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21649..23025)
DNA (1377bp) protein (459aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] id=14625120 bin=bin7_NC10_sister species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
glnA; glutamine synthetase Tax=RBG_16_Actinobacteria_68_12_curated
glutamate--ammonia ligase
13_1_20cm_4_scaffold_172_22
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23115..24716)
DNA (1602bp) protein (534aa)
Ethanolamine:proton symporter, EAT family n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0ITB4_MYCSM
Ethanolamine:proton symporter, EAT family {ECO:0000313|EMBL:AGB22780.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sme
ethanolamine:proton symporter, EAT family
13_1_20cm_4_scaffold_172_23
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

24897..25658
DNA (762bp) protein (254aa)
Transcriptional regulator n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IV29_MYCSM
PhnF; transcriptional regulator; K03710 GntR family transcriptional regulator Tax=RBG_13_Chloroflexi_68_17_curated
transcriptional regulator
13_1_20cm_4_scaffold_172_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

25655..26497
DNA (843bp) protein (281aa)
aroF; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
aroF; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAP0_METCZ
13_1_20cm_4_scaffold_172_25
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

26509..27546
DNA (1038bp) protein (346aa)
zinc-containing alcohol dehydrogenase (EC:1.1.1.-) Tax=CG_Elusi_02
L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase n=1 Tax=Treponema primitia RepID=UPI0002554D48
13_1_20cm_4_scaffold_172_26
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

27558..29030
DNA (1473bp) protein (491aa)
Xylulokinase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I363_9FIRM rbh
xylulokinase Tax=RBG_16_Chloroflexi_48_8_curated
xylulokinase
13_1_20cm_4_scaffold_172_27
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29035..30372
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1B3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP61852.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
aminotransferase class III protein
13_1_20cm_4_scaffold_172_28
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30369..31067
DNA (699bp) protein (233aa)
Glutamine amidotransferase class-I n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L415_FRASN
Glutamine amidotransferase class-I {ECO:0000313|EMBL:ABW11830.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
glutamine amidotransferase
13_1_20cm_4_scaffold_172_29
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31064..32344
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BU17_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:BAN69584.1}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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