ggKbase home page

13_1_20cm_4_scaffold_1807

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1807_1
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3..725)
DNA (723bp) protein (241aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J558_ANAD2
valyl-tRNA synthetase
13_1_20cm_4_scaffold_1807_2
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(839..1984)
DNA (1146bp) protein (382aa)
Response regulator n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08YB2_STIAD
Basic proline-rich protein {ECO:0000313|EMBL:ERK92174.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myx
response regulator
13_1_20cm_4_scaffold_1807_3
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2060..3616)
DNA (1557bp) protein (519aa)
60 kDa chaperonin n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08YB7_STIAD
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=378806 speci
groL; 60 kda chaperonin, groel protein
13_1_20cm_4_scaffold_1807_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3766..4452
DNA (687bp) protein (229aa)
Putative lipoprotein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8W0_ANADF
Putative lipoprotein {ECO:0000313|EMBL:ABS25156.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
putative lipoprotein
13_1_20cm_4_scaffold_1807_5
unknown

Not on your lists

4449..4898
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_20cm_4_scaffold_1807_6
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4840..7506
DNA (2667bp) protein (889aa)
Glycerol-3-phosphate 1-O-acyltransferase {ECO:0000256|SAAS:SAAS00182414}; EC=2.3.1.15 {ECO:0000256|SAAS:SAAS00182414};; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcal
glycerol-3-phosphate acyltransferase (EC:2.3.1.15)
Glycerol-3-phosphate acyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IQH8_ANADE rbh
13_1_20cm_4_scaffold_1807_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7620..8546
DNA (927bp) protein (309aa)
Fructose-bisphosphate aldolase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N0G5_CORCM rbh
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:KFA93123.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sou
fba2; fructose-bisphosphate aldolase
13_1_20cm_4_scaffold_1807_8
unknown

Not on your lists

comp(8549..9301)
DNA (753bp) protein (251aa)

This feature has no annotations

13_1_20cm_4_scaffold_1807_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9298..9678)
DNA (381bp) protein (127aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococca
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKV5_ANADE
putative 6-pyruvoyl tetrahydropterin synthase
13_1_20cm_4_scaffold_1807_10
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9706..10389)
DNA (684bp) protein (228aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJM6_HALO1
Crp/Fnr family transcriptional regulator Tax=RifOxyA12_full_Proteobacteria_58_15_curated
Crp/Fnr family transcriptional regulator
13_1_20cm_4_scaffold_1807_11
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10580..11368
DNA (789bp) protein (263aa)
Thiazole synthase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AUP7_PELPD
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG Tax=RBG_16_Anaeromyxobacter_69_14_curated
thiG; thiazole synthase
13_1_20cm_4_scaffold_1807_12
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11365..11970
DNA (606bp) protein (202aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HA10_ANADF
thiamine-phosphate pyrophosphorylase
13_1_20cm_4_scaffold_1807_13
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(12014..12697)
DNA (684bp) protein (228aa)
hypothetical protein; K06966 Tax=RBG_16_Zixibacteria_43_9_curated
13_1_20cm_4_scaffold_1807_14
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12706..14427)
DNA (1722bp) protein (574aa)
Two-component hybrid sensor and regulator n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LR3_SYMTH
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAD41383.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobac
two-component hybrid sensor and regulator
13_1_20cm_4_scaffold_1807_15
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14424..14795)
DNA (372bp) protein (124aa)
ppkA; serine/threonine protein kinase PpkA; K11912 serine/threonine-protein kinase PpkA [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
OmpR family two-component system response regulator n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IHZ6_PHYMF
OmpR family two-component system response regulator
13_1_20cm_4_scaffold_1807_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14806..15936)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46739.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobac
hypothetical protein
13_1_20cm_4_scaffold_1807_17
unknown

Not on your lists

16069..16758
DNA (690bp) protein (230aa)

This feature has no annotations

13_1_20cm_4_scaffold_1807_18
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16725..17306)
DNA (582bp) protein (194aa)
TPR domain protein, putative component of TonB system n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NY57_9DELT
TPR domain protein, putative component of TonB system {ECO:0000313|EMBL:EPX55831.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacterac
tgl; social gliding motility protein Tgl
13_1_20cm_4_scaffold_1807_19
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17788..18630)
DNA (843bp) protein (281aa)
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase FolE2 n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C2Z0_DESTA
cytoplasmic protein; K09007 hypothetical protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
13_1_20cm_4_scaffold_1807_20
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18627..19529)
DNA (903bp) protein (301aa)
PhzF family phenazine biosynthesis protein; K06998 Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Phenazine biosynthesis protein PhzF family id=4605550 bin=GWC2_Ignavibacteria_56_12 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
13_1_20cm_4_scaffold_1807_21
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19526..20158)
DNA (633bp) protein (211aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JDE6_ANAD2 rbh
radical SAM protein
13_1_20cm_4_scaffold_1807_22
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20207..21985)
DNA (1779bp) protein (593aa)
M61 family peptidase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CD96_MYXFH
Peptidase M61 {ECO:0000313|EMBL:AKF80873.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvu
M61 family peptidase
13_1_20cm_4_scaffold_1807_23
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22016..22564)
DNA (549bp) protein (183aa)
Lytic murein transglycosylase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08XG9_STIAD
Lytic murein transglycosylase {ECO:0000313|EMBL:EAU65199.1}; Transglycosylase SLT domain protein {ECO:0000313|EMBL:ADO72787.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myx
transglycosylase slt domain-containing protein
13_1_20cm_4_scaffold_1807_24
unknown

Not on your lists

comp(22561..22902)
DNA (342bp) protein (114aa)
hypothetical protein
13_1_20cm_4_scaffold_1807_25
unknown

Not on your lists

comp(23104..23430)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_20cm_4_scaffold_1807_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23534..24691
DNA (1158bp) protein (386aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLK7_SORCE
polyphosphate kinase
Displaying 26 items

View Taxonomy