ggKbase home page

13_1_20cm_4_scaffold_2509

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2509_1
unknown

Not on your lists

2..241
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_20cm_4_scaffold_2509_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(245..1117)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A618_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_2509_3
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(1114..2358)
DNA (1245bp) protein (415aa)
Glycosyl transferase family 9 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XV96_9BACT
Glycosyl transferase family 9 {ECO:0000313|EMBL:EHO40602.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
family 9 glycosyl transferase
13_1_20cm_4_scaffold_2509_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2366..4027
DNA (1662bp) protein (554aa)
Putative response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A620_GEMAT
putative response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative response regulator
13_1_20cm_4_scaffold_2509_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4028..5830
DNA (1803bp) protein (601aa)
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Lipid A export ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A621_GEMAT
ABC transporter transmembrane region
13_1_20cm_4_scaffold_2509_6
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

5846..8053
DNA (2208bp) protein (736aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0I5_EMTOG
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
13_1_20cm_4_scaffold_2509_7
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(8142..9083)
DNA (942bp) protein (314aa)
glycosyltransferase Tax=GWA1_Bdellovibrionales_52_35_curated
Uncharacterized protein id=2482461 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
glycosyltransferase
13_1_20cm_4_scaffold_2509_8
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9113..10207
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00035E4FED
Glycosyltransferase Tax=RBG_16_Planctomycetes_64_12_curated
group 1 glycosyl transferase
13_1_20cm_4_scaffold_2509_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10220..10978
DNA (759bp) protein (253aa)
Glycosyltransferase {ECO:0000313|EMBL:BAH40163.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAH40163.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" sou
glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACD6_GEMAT
13_1_20cm_4_scaffold_2509_10
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10971..12146
DNA (1176bp) protein (392aa)
Glycosyl transferase group 1 n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S3E1_9CYAN
Glycosyl transferase group 1 {ECO:0000313|EMBL:AFY65147.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
group 1 glycosyl transferase
13_1_20cm_4_scaffold_2509_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12143..13336
DNA (1194bp) protein (398aa)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:ABC45158.1}; EC=2.4.1.- {ECO:0000313|EMBL:ABC45158.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
Glycosyl transferase group 1 n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S3E1_9CYAN
glycoside hydrolase
13_1_20cm_4_scaffold_2509_12
unknown

Not on your lists

comp(13284..13715)
DNA (432bp) protein (144aa)
Patatin
13_1_20cm_4_scaffold_2509_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14340..15125
DNA (786bp) protein (262aa)
Putative peptide ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A623_GEMAT
Putative peptide ABC transporter permease protein {ECO:0000313|EMBL:BAH37683.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatim
putative peptide ABC transporter permease protein
13_1_20cm_4_scaffold_2509_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15122..16309
DNA (1188bp) protein (396aa)
Putative aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A624_GEMAT
putative aminotransferase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative aminotransferase
13_1_20cm_4_scaffold_2509_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16316..17578)
DNA (1263bp) protein (421aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
Tyrosine--tRNA ligase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=SYY_ANASK
Tyrosyl-tRNA synthetase
13_1_20cm_4_scaffold_2509_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17650..18111
DNA (462bp) protein (154aa)
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Penicillin-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A626_GEMAT
penicillin-binding protein
Displaying 16 items

View Taxonomy