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13_1_20cm_4_scaffold_3139

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3139_1
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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418..969
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ6 RepID=UPI00035DDE7B
Uncharacterized protein {ECO:0000313|EMBL:KJS06172.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
transmembrane rdd family protein
13_1_20cm_4_scaffold_3139_2
unknown

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1050..1796
DNA (747bp) protein (249aa)

This feature has no annotations

13_1_20cm_4_scaffold_3139_3
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

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1977..3047
DNA (1071bp) protein (357aa)
response regulator receiver protein id=4393067 bin=GWC2_ACD39_50_8 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
response regulator receiver protein
Tax=BJP_IG2102_ACD39_51_10
13_1_20cm_4_scaffold_3139_4
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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3056..3937
DNA (882bp) protein (294aa)
HEAT repeat-containing PBS lyase Tax=GWC2_Nitrospirae_57_13_curated
PBS lyase HEAT domain protein repeat-containing protein id=1941266 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
HEAT repeat-containing protein
13_1_20cm_4_scaffold_3139_5
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

4041..5276
DNA (1236bp) protein (412aa)
Type II secretion system protein E n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7N3_CHLAD
Type II secretion system protein E {ECO:0000313|EMBL:ACL26068.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="C
type II secretion system protein E
13_1_20cm_4_scaffold_3139_6
unknown

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5305..5724
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_20cm_4_scaffold_3139_7
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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5702..6091
DNA (390bp) protein (130aa)
Type II secretion system protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E6C3_9FIRM
Type II secretion system protein F Tax=S_Thermoanaerobacterales_50_218
type II secretion system F domain-containing protein
13_1_20cm_4_scaffold_3139_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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6095..7030
DNA (936bp) protein (312aa)
Type II secretion system protein n=2 Tax=Chloroflexus RepID=A9WE98_CHLAA
putative bacterial type II secretion system protein; K12511 tight adherence protein C Tax=RBG_16_Chloroflexi_63_12_curated
type II secretion system protein
13_1_20cm_4_scaffold_3139_9
unknown

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7030..7587
DNA (558bp) protein (186aa)

This feature has no annotations

13_1_20cm_4_scaffold_3139_10
unknown

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comp(7888..8052)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_4_scaffold_3139_11
unknown

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8187..9983
DNA (1797bp) protein (599aa)

This feature has no annotations

13_1_20cm_4_scaffold_3139_12
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10046..11167
DNA (1122bp) protein (374aa)
Type II secretion system protein E n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQ11_DESK7
Type II secretion system protein E {ECO:0000313|EMBL:AEG16220.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ku
type II secretion system protein E
13_1_20cm_4_scaffold_3139_13
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11258..11716
DNA (459bp) protein (153aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAM
Tryptophan 2,3-dioxygenase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=T23O_ANADE
tryptophan 2,3-dioxygenase
13_1_20cm_4_scaffold_3139_14
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11817..13073
DNA (1257bp) protein (419aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-R
Kynureninase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NHJ2_ROSCS
kynureninase
13_1_20cm_4_scaffold_3139_15
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13070..14440)
DNA (1371bp) protein (457aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CCH29719.1};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudono
trpB2; Tryptophan synthase beta chain 2 (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JYD7_SACES rbh
13_1_20cm_4_scaffold_3139_16
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14560..16791)
DNA (2232bp) protein (744aa)
Salicylyl-CoA 5-hydroxylase n=3 Tax=Amycolatopsis mediterranei RepID=D8HIY5_AMYMU rbh
Salicylyl-CoA 5-hydroxylase {ECO:0000313|EMBL:AEK47059.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (s
salicylyl-CoA 5-hydroxylase
13_1_20cm_4_scaffold_3139_17
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16914..17894)
DNA (981bp) protein (327aa)
AMP-dependent synthetase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626CEB
Dicarboxylate-CoA ligase PimA {ECO:0000313|EMBL:AIJ23760.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica
acs; dicarboxylate-CoA ligase PimA
Displaying 17 items

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