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13_1_20cm_4_scaffold_330

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_330_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1..1479
DNA (1479bp) protein (493aa)
OmpA/MotB domain protein n=1 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RRK1_FIBSS
OmpA/MotB domain-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
OmpA family protein
13_1_20cm_4_scaffold_330_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1567..5886
DNA (4320bp) protein (1440aa)
Peptidase M14, carboxypeptidase A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028C7_SOLUE
peptidase M14, carboxypeptidase A Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M14 carboxypeptidase A
13_1_20cm_4_scaffold_330_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5936..7150
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EIN0_THECK
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative glycosyl hydrolase domain DUF4015
13_1_20cm_4_scaffold_330_4
unknown

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7168..7875
DNA (708bp) protein (236aa)

This feature has no annotations

13_1_20cm_4_scaffold_330_5
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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comp(7972..9993)
DNA (2022bp) protein (674aa)
leuC2; 3-isopropylmalate dehydratase (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_16_Acidobacteria_68_9_curated
leuC2; 3-isopropylmalate dehydratase (EC:4.2.1.33)
3-isopropylmalate dehydratase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G0G3_SORC5
13_1_20cm_4_scaffold_330_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10074..11708
DNA (1635bp) protein (545aa)
Peptidase M28 n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QCN4_9CYAN
Predicted aminopeptidase {ECO:0000313|EMBL:CDM65305.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M28
13_1_20cm_4_scaffold_330_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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11925..13034
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_330_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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13103..13750
DNA (648bp) protein (216aa)
Transcriptional regulator TrmB n=1 Tax=Roseburia sp. CAG:182 RepID=R7QVP5_9FIRM
transcriptional regulator TrmB Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_330_9
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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13756..14691
DNA (936bp) protein (312aa)
Putative hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIB7_CHLTF
Putative hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:AEP11575.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacteriu
putative alpha/beta superfamily hydrolase
13_1_20cm_4_scaffold_330_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14726..15325
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JE48_ANAD2
TetR family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
TetR family transcriptional regulator
13_1_20cm_4_scaffold_330_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15315..17756)
DNA (2442bp) protein (814aa)
lon; ATP-dependent Lon protease (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Lon protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM1_GEMAT rbh
ATP-dependent protease La
Displaying 11 items

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