ggKbase home page

13_1_20cm_4_scaffold_390

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_390_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1..336
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1AHN6_9ZZZZ
nitrogenase subunit NifH (ATPase)-like protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_390_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

433..891
DNA (459bp) protein (153aa)
Flavin reductase domain protein FMN-binding n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WSI5_ALIAD
flavin reductase domain-containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
flavin reductase domain-containing FMN-binding protein
13_1_20cm_4_scaffold_390_3
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(966..1817)
DNA (852bp) protein (284aa)
sulfate ABC transporter permease; K02046 sulfate transport system permease protein Tax=CSP1_8_Deltaproteobacteria
sulfate ABC transporter permease; K02046 sulfate transport system permease protein id=14623749 bin=bin5_DeltaP species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
modB; molybdate ABC transporter
13_1_20cm_4_scaffold_390_4
unknown

Not on your lists

comp(1841..2827)
DNA (987bp) protein (329aa)

This feature has no annotations

13_1_20cm_4_scaffold_390_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2814..3701)
DNA (888bp) protein (296aa)
polyamine-transporting ATPase (EC:3.6.3.31); K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Sulfate ABC transporter, ATPase subunit n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9C9_ANAD2
sulfate ABC transporter ATPase
13_1_20cm_4_scaffold_390_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3844..4887
DNA (1044bp) protein (348aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
HTH DNA-binding protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0AHF2_9EURY
putative PAS/PAC sensor protein
13_1_20cm_4_scaffold_390_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5093..5569
DNA (477bp) protein (159aa)
Endoribonuclease L-PSP n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRL3_TRURR
hypothetical protein; K07567 TdcF protein Tax=RBG_16_Euryarchaeota_68_12_curated
endoribonuclease L-PSP
13_1_20cm_4_scaffold_390_8
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(5566..6942)
DNA (1377bp) protein (459aa)
ABC transport system ATP-binding protein P1P2A1A2 n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q978R3_THEVO rbh
ABC transport system ATP-binding protein P1P2A1A2 {ECO:0000313|EMBL:BAB60494.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" so
ABC-type peptide transporter, ATPase component
13_1_20cm_4_scaffold_390_9
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(6929..8386)
DNA (1458bp) protein (486aa)
ABC transport system ATP-binding protein P1P2A1A2 n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q978R2_THEVO rbh
ABC transport system ATP-binding protein P1P2A1A2 {ECO:0000313|EMBL:BAB60495.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" so
ABC-type peptide transport system, ATPase component
13_1_20cm_4_scaffold_390_10
Metallosphaera sedula, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(8450..9400)
DNA (951bp) protein (317aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YIU1_METS5
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AIM28326.1}; TaxID=43687 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphae
peptide ABC transporter permease
13_1_20cm_4_scaffold_390_11
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(9408..10469)
DNA (1062bp) protein (354aa)
ABC transport system permease protein P1P2A1A2 n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q978R0_THEVO rbh
ABC transport system permease protein P1P2A1A2 {ECO:0000313|EMBL:BAB60497.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" sourc
ABC-type peptide transport system, permease component
13_1_20cm_4_scaffold_390_12
unknown

Not on your lists

10628..10939
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_20cm_4_scaffold_390_13
Metallosphaera yellowstonensis, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(10936..13755)
DNA (2820bp) protein (940aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C736_9CREN
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EHP69613.1}; Flags: Precursor;; TaxID=671065 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Me
peptide ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_390_14
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(14018..14890)
DNA (873bp) protein (291aa)
DNA primase small subunit n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KP20_ARCVS
DNA primase small subunit {ECO:0000313|EMBL:AEA46328.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus
DNA primase small subunit
13_1_20cm_4_scaffold_390_15
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14890..15717)
DNA (828bp) protein (276aa)
2,5-didehydrogluconate reductase (EC:1.1.1.274)
2,5-didehydrogluconate reductase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJG8_ANADE
Prostaglandin F synthase {ECO:0000313|EMBL:GAO04067.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_20cm_4_scaffold_390_16
GWA2_RIF01_43_8_curated, RIF1, Bacteria

Not on your lists

comp(15765..16964)
DNA (1200bp) protein (400aa)
glycine cleavage system protein T (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=GWA2_RIF01_43_8_curated
Aminomethyltransferase n=1 Tax=bacterium symbiont of Plakortis simplex pPS11G3 RepID=V5JAF1_9BACT
Glycine cleavage system T protein (aminomethyltransferase)
13_1_20cm_4_scaffold_390_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(17062..18216)
DNA (1155bp) protein (385aa)
glycine cleavage system protein T (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RBG_16_Euryarchaeota_67_27_curated
Aminomethyltransferase n=1 Tax=bacterium symbiont of Plakortis simplex pPS11G3 RepID=V5JAF1_9BACT
glycine cleavage system T protein (aminomethyltransferase)
Displaying 17 items

View Taxonomy