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13_1_20cm_4_scaffold_403

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_403_1
unknown

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3..200
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_4_scaffold_403_2
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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279..1463
DNA (1185bp) protein (395aa)
ATP-dependent DNA helicase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NHA8_GLOVI
ATP-dependent DNA helicase {ECO:0000313|EMBL:BAC90570.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).
recQ; ATP-dependent DNA helicase
13_1_20cm_4_scaffold_403_3
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1593..2870
DNA (1278bp) protein (426aa)
Aminotransferase class V {ECO:0000313|EMBL:ACL61852.1}; EC=2.6.1.45 {ECO:0000313|EMBL:ACL61852.1};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriacea
aminotransferase class V protein (EC:2.6.1.45)
Serine--glyoxylate transaminase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UC57_METS4
13_1_20cm_4_scaffold_403_4
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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2867..3841
DNA (975bp) protein (325aa)
Malyl-CoA lyase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037681F4
citrate lyase beta subunit Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
citrate lyase beta subunit
13_1_20cm_4_scaffold_403_5
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3845..5020
DNA (1176bp) protein (392aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
malate--CoA ligase subunit beta n=1 Tax=Rhodocyclaceae RepID=UPI00037CFC58
malate--CoA ligase subunit beta
13_1_20cm_4_scaffold_403_6
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5017..5931
DNA (915bp) protein (305aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKX0_METPP rbh
13_1_20cm_4_scaffold_403_7
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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5928..6908
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003651D8D
2-hydroxyacid dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
2-hydroxyacid dehydrogenase
13_1_20cm_4_scaffold_403_8
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6905..9640
DNA (2736bp) protein (912aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkh
Phosphoenolpyruvate carboxylase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UCZ3_METS4
phosphoenolpyruvate carboxylase
13_1_20cm_4_scaffold_403_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9658..10878
DNA (1221bp) protein (407aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAH38743.1}; EC=1.3.99.- {ECO:0000313|EMBL:BAH38743.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;"
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A933_GEMAT
13_1_20cm_4_scaffold_403_10
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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comp(10902..13067)
DNA (2166bp) protein (722aa)
prolyl oligopeptidase (EC:3.4.21.26)
prolyl endopeptidase n=1 Tax=Chlorogloeopsis RepID=UPI000300DF20 rbh
Prolyl endopeptidase {ECO:0000313|EMBL:KIF32544.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
13_1_20cm_4_scaffold_403_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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13645..14760
DNA (1116bp) protein (372aa)
cafA; ribonuclease G (EC:3.1.-.-); K08301 ribonuclease G [EC:3.1.26.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cafA; ribonuclease G (EC:3.1.-.-)
Ribonuclease G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A932_GEMAT
13_1_20cm_4_scaffold_403_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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14823..15143
DNA (321bp) protein (107aa)
50S ribosomal protein L21 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A931_GEMAT
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L21
13_1_20cm_4_scaffold_403_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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15152..15424
DNA (273bp) protein (91aa)
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
LSU ribosomal protein L27P
50S ribosomal protein L27 id=1962295 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
13_1_20cm_4_scaffold_403_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(15421..16629)
DNA (1209bp) protein (403aa)
Imidazolonepropionase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y3F7_9PROT
Amidohydrolase {ECO:0000313|EMBL:AHG90871.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amidohydrolase
13_1_20cm_4_scaffold_403_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(16626..18056)
DNA (1431bp) protein (477aa)
amidohydrolase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5895F rbh
Amidohydrolase {ECO:0000313|EMBL:AHG90870.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amidohydrolase
13_1_20cm_4_scaffold_403_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(18077..18523)
DNA (447bp) protein (149aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 16 items

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