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13_1_20cm_4_scaffold_501

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_501_1
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42..629)
DNA (588bp) protein (196aa)
RNA polymerase sigma factor RpoE n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PDX0_9DELT
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Delta_07
RNA polymerase sigma-E factor
13_1_20cm_4_scaffold_501_2
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(693..1457)
DNA (765bp) protein (255aa)
Putative cAMP phosphodiesterases class-II n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MVZ1_CORCM
cAMP phosphodiesterase {ECO:0000313|EMBL:AKF80992.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
cpdP; putative cAMP phosphodiesterases class-II
13_1_20cm_4_scaffold_501_3
unknown

Not on your lists

1917..3761
DNA (1845bp) protein (615aa)

This feature has no annotations

13_1_20cm_4_scaffold_501_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3821..4840
DNA (1020bp) protein (340aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000255|HAMAP-Rule:MF_00741}; EC=6.3.3.1 {ECO:0000255|HAMAP-Rule:MF_00741};; AIR synthase {ECO:0000255|HAMAP-Rule:MF_00741}; AIRS {ECO:0000255|HAMAP
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=PUR5_ANADF rbh
phosphoribosylaminoimidazole synthetase
13_1_20cm_4_scaffold_501_5
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4837..5493
DNA (657bp) protein (219aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JDJ1_ANAD2
phosphoribosylglycinamide formyltransferase
13_1_20cm_4_scaffold_501_6
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5490..6749
DNA (1260bp) protein (420aa)
Phytoene dehydrogenase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IQE4_ANADE
Phytoene dehydrogenase {ECO:0000313|EMBL:ABC81027.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" so
phytoene dehydrogenase
13_1_20cm_4_scaffold_501_7
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6801..6992
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U9A8_MYXSD
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="
50S ribosomal protein L28
13_1_20cm_4_scaffold_501_8
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7005..8543
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGY4_ANASK rbh
Uncharacterized protein {ECO:0000313|EMBL:ACG73838.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
hypothetical protein
13_1_20cm_4_scaffold_501_9
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8560..9318)
DNA (759bp) protein (253aa)
Putative short chain dehydrogenase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QUH9_9DELT
Oxidoreductase {ECO:0000313|EMBL:KFA93353.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter
short chain dehydrogenase/reductase family oxidoreductase
13_1_20cm_4_scaffold_501_10
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9376..9744
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036FEC3D
Lactoylglutathione lyase and related lyase {ECO:0000313|EMBL:AJQ93002.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynue
lactoylglutathione lyase and related lyase
13_1_20cm_4_scaffold_501_11
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9747..10607
DNA (861bp) protein (287aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGY9_ANASK rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
13_1_20cm_4_scaffold_501_12
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10614..11120)
DNA (507bp) protein (169aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; C
Methylenetetrahydrofolate reductase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2ILB5_ANADE
5,10-methylenetetrahydrofolate reductase
13_1_20cm_4_scaffold_501_13
unknown

Not on your lists

comp(11147..12163)
DNA (1017bp) protein (339aa)

This feature has no annotations

13_1_20cm_4_scaffold_501_14
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12183..14582
DNA (2400bp) protein (800aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D938_MYXXD
Uncharacterized protein {ECO:0000313|EMBL:ABF91958.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
hypothetical protein
13_1_20cm_4_scaffold_501_15
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14575..18264
DNA (3690bp) protein (1230aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxoco
ATP-dependent DNA helicase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MXK7_CORCM rbh
addA; ATP-dependent DNA helicase
13_1_20cm_4_scaffold_501_16
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18721..20277
DNA (1557bp) protein (519aa)
Alkaline phosphatase synthesis sensor protein PhoR n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q097K6_STIAD rbh
Histidine kinase {ECO:0000313|EMBL:AKF79982.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fu
sensor protein
13_1_20cm_4_scaffold_501_17
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20303..20986
DNA (684bp) protein (228aa)
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R6U8_9DELT
Chemotaxis protein CheY {ECO:0000313|EMBL:KFA86774.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
DNA-binding response regulator
13_1_20cm_4_scaffold_501_18
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

20996..21538
DNA (543bp) protein (181aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=CG_Elusi_04
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF3_CHLTF
13_1_20cm_4_scaffold_501_19
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21535..23706)
DNA (2172bp) protein (724aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17)
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IN01_ANADE rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:AKF04799.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinu
13_1_20cm_4_scaffold_501_20
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23709..24638)
DNA (930bp) protein (310aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ACL63793.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ACL63793.1};; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterin
fadI; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JAY2_ANAD2
13_1_20cm_4_scaffold_501_21
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24875..25213)
DNA (339bp) protein (113aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FFN6_STIAD
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO73959.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" s
hypothetical protein
13_1_20cm_4_scaffold_501_22
unknown

Not on your lists

comp(25223..26410)
DNA (1188bp) protein (396aa)

This feature has no annotations

13_1_20cm_4_scaffold_501_23
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26464..27096
DNA (633bp) protein (211aa)
Methyltransferase type 11 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JD19_ANAD2
Methyltransferase type 11 {ECO:0000313|EMBL:ACL64047.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
type 11 methyltransferase
13_1_20cm_4_scaffold_501_24
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27093..27908
DNA (816bp) protein (272aa)
Metallophosphoesterase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U500_MYXSD
Metallophosphoesterase {ECO:0000313|EMBL:AGC42642.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
metallophosphoesterase
13_1_20cm_4_scaffold_501_25
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(27924..29699)
DNA (1776bp) protein (592aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U3B4_DEIML
diguanylate cyclase with PAS/PAC, CBS and GAF sensors Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
GAF sensor-containing diguanylate cyclase
13_1_20cm_4_scaffold_501_26
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29807..30019)
DNA (213bp) protein (71aa)
ABC transporter, permease protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FYU2_STIAD
Cell division protein FtsX {ECO:0000313|EMBL:KFE69631.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="H
putative ABC transporter permease
13_1_20cm_4_scaffold_501_27
unknown

Not on your lists

30185..31009
DNA (825bp) protein (275aa)

This feature has no annotations

13_1_20cm_4_scaffold_501_28
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30978..32282)
DNA (1305bp) protein (435aa)
ABC transporter, inner membrane subunit n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IH62_ANADE rbh
ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABC83920.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
ABC transporter inner membrane subunit
13_1_20cm_4_scaffold_501_29
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32279..33037)
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U849_MYXSD
ABC transporter {ECO:0000313|EMBL:AKF81397.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus ful
ABC transporter ATP-binding protein
Displaying 29 items

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