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13_1_20cm_4_scaffold_520

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_520_1
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(1..1695)
DNA (1695bp) protein (565aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHX4_9BACT
peptidase M1 membrane alanine aminopeptidase Tax=RBG_16_Zixibacteria_50_21_curated
peptidase M1 membrane alanine aminopeptidase
13_1_20cm_4_scaffold_520_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1948..3027)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI0003821674
kamA; Lysine 2,3-aminomutase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
kamA; Lysine 2,3-aminomutase
13_1_20cm_4_scaffold_520_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2999..3499)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI00037944CE
N-acetyltransferase GCN5 Tax=RBG_16_Gemmatimonadetes_66_8_curated
N-acetyltransferase
13_1_20cm_4_scaffold_520_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3450..4475)
DNA (1026bp) protein (342aa)
D-alanine--D-alanine ligase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-alanine-D-alanine ligase-like protein id=2423735 bin=GWA2_Ignavibacteriae_54_16_partial species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
ATP-grasp enzyme, D-alanine-D-alanine ligase
13_1_20cm_4_scaffold_520_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4472..5557)
DNA (1086bp) protein (362aa)
D-alanine-D-alanine ligase-like protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YWW1_MELRP
D-alanine-D-alanine ligase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-alanine-D-alanine ligase-like protein
13_1_20cm_4_scaffold_520_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5695..6447)
DNA (753bp) protein (251aa)
thyX; thymidylate synthase (EC:2.1.1.148); K03465 thymidylate synthase (FAD) [EC:2.1.1.148] Tax=GWC2_Gemmatimonadetes_71_10_curated
thyX; thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J0_GEMAT
13_1_20cm_4_scaffold_520_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6453..8102)
DNA (1650bp) protein (550aa)
Putative FAD linked oxidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J2_GEMAT
putative FAD linked oxidase; K06911 Tax=GWC2_Gemmatimonadetes_71_10_curated
FAD linked oxidase domain protein
13_1_20cm_4_scaffold_520_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8173..8979
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000373C3C0
hypothetical protein; K09729 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF116
13_1_20cm_4_scaffold_520_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8987..9508)
DNA (522bp) protein (174aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_520_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9550..10092)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q607D5_METCA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_520_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10135..11022)
DNA (888bp) protein (296aa)
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJN9_9BACT
13_1_20cm_4_scaffold_520_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11051..11884)
DNA (834bp) protein (278aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_520_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11887..12723)
DNA (837bp) protein (279aa)
Band 7 protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QFY0_DESB2
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_520_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12735..13940)
DNA (1206bp) protein (402aa)
putative acyltransferase (EC:2.3.1.9); K07508 acetyl-CoA acyltransferase 2 [EC:2.3.1.16] Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative acyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase id=1250066 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_20cm_4_scaffold_520_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14079..15419)
DNA (1341bp) protein (447aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW5_KORVE
Amino acid permease {ECO:0000313|EMBL:AHG93630.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amino acid permease
13_1_20cm_4_scaffold_520_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15416..16462)
DNA (1047bp) protein (349aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:CDM65964.1}; EC=1.1.1.85 {ECO:0000313|EMBL:CDM65964.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
3-isopropylmalate dehydrogenase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08ME8_STIAD
3-isopropylmalate dehydrogenase
13_1_20cm_4_scaffold_520_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16459..17148)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J8_GEMAT
Double zinc ribbon Tax=RBG_16_Gemmatimonadetes_66_8_curated
Double zinc ribbon
13_1_20cm_4_scaffold_520_18
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(17145..18062)
DNA (918bp) protein (306aa)
Amicyanin n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L1U3_METC4
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
blue (type 1) copper domain protein
13_1_20cm_4_scaffold_520_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18130..18633)
DNA (504bp) protein (168aa)
CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cd allosteric enzyme id=3383322 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
CMP/dCMP deaminase
13_1_20cm_4_scaffold_520_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18620..19207)
DNA (588bp) protein (196aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
rnhA; ribonuclease HI (EC:3.1.26.4)
Ribonuclease HI n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K0_GEMAT
13_1_20cm_4_scaffold_520_21
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19209..19961)
DNA (753bp) protein (251aa)
universal stress protein Tax=CG_Syntroph_01
13_1_20cm_4_scaffold_520_22
unknown

Not on your lists

comp(19964..20182)
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying 22 items

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