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13_1_20cm_4_scaffold_606

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_606_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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3..494
DNA (492bp) protein (164aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Putative 6-pyruvoyl tetrahydropterin synthase n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS7_9BACT
hypothetical protein
13_1_20cm_4_scaffold_606_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

497..844
DNA (348bp) protein (116aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomira
Transcriptional coactivator/pterin dehydratase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA0_9BACT
transcriptional coactivator/pterin dehydratase
13_1_20cm_4_scaffold_606_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2022..3221)
DNA (1200bp) protein (400aa)
trmE; putative tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA modification GTPase MnmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP6_GEMAT
trmE; putative tRNA modification GTPase TrmE
13_1_20cm_4_scaffold_606_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3360..4643)
DNA (1284bp) protein (428aa)
Membrane protein insertase YidC n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=YIDC_CHLTE
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=RBG_16_Gemmatimonadetes_66_8_curated
Membrane protein oxaA
13_1_20cm_4_scaffold_606_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(4780..5007)
DNA (228bp) protein (76aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Cyanothece RepID=YIDD_CYAA5
hypothetical protein; K08998 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_606_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5638..7032
DNA (1395bp) protein (465aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G6_GEMAT
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Chromosomal replication initiator protein dnaA
13_1_20cm_4_scaffold_606_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7274..8386
DNA (1113bp) protein (371aa)
dnaN; DNA polymerase III beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA polymerase III subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G7_GEMAT
DNA polymerase III, beta subunit
13_1_20cm_4_scaffold_606_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8369..8911)
DNA (543bp) protein (181aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] id=12555739 bin=CNBR_ACIDO species=unknown genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
13_1_20cm_4_scaffold_606_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9123..10595
DNA (1473bp) protein (491aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM0_GEMAT
protein kinase
13_1_20cm_4_scaffold_606_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(10513..11373)
DNA (861bp) protein (287aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_606_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(11373..11705)
DNA (333bp) protein (111aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_4_scaffold_606_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(12146..12361)
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_606_13
unknown

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comp(12646..14427)
DNA (1782bp) protein (594aa)

This feature has no annotations

13_1_20cm_4_scaffold_606_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(14451..15179)
DNA (729bp) protein (243aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE80_GEMAT
Transcriptional activator domain-containing protein {ECO:0000313|EMBL:AHG89219.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
transcriptional activator domain-containing protein
13_1_20cm_4_scaffold_606_15
unknown

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15291..15836
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_20cm_4_scaffold_606_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(15840..16670)
DNA (831bp) protein (277aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL9_GEMAT
protein kinase
13_1_20cm_4_scaffold_606_17
unknown

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comp(16754..17236)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_20cm_4_scaffold_606_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17233..18264)
DNA (1032bp) protein (344aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_606_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(18415..20775)
DNA (2361bp) protein (787aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE65_GEMAT
Protein kinase {ECO:0000313|EMBL:AHG91672.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein kinase
13_1_20cm_4_scaffold_606_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

21232..23109
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ06_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEF60233.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
hypothetical protein
13_1_20cm_4_scaffold_606_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23146..24009
DNA (864bp) protein (288aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G9_GEMAT
AraC family transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
AraC family transcriptional regulator
13_1_20cm_4_scaffold_606_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24017..25690)
DNA (1674bp) protein (558aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H1_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_1_20cm_4_scaffold_606_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25687..26100)
DNA (414bp) protein (138aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=GWC2_Gemmatimonadetes_71_10_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H2_GEMAT
13_1_20cm_4_scaffold_606_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26093..27007)
DNA (915bp) protein (305aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H3_GEMAT
13_1_20cm_4_scaffold_606_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

27055..28422
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H4_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_4_scaffold_606_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

28419..30686
DNA (2268bp) protein (756aa)
putative soluble lytic murein transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Probable soluble lytic murein transglycosylase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZR1_THERP
putative soluble lytic murein transglycosylase
13_1_20cm_4_scaffold_606_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

30788..30988
DNA (201bp) protein (67aa)
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG88687.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Cold-shock protein DNA-binding protein
Cold-shock DNA-binding protein family id=1962858 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
13_1_20cm_4_scaffold_606_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

31116..33920
DNA (2805bp) protein (935aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H5_GEMAT
13_1_20cm_4_scaffold_606_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

34021..34398
DNA (378bp) protein (126aa)
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H6_GEMAT
Putative pilin {ECO:0000313|EMBL:AHG88689.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative pilin
13_1_20cm_4_scaffold_606_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

34497..34673
DNA (177bp) protein (59aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
Displaying items 1-30 of 31 in total

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