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13_1_20cm_4_scaffold_6522

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_6522_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

1..1260
DNA (1260bp) protein (420aa)
fabF2; 3-oxoacyl-ACP synthase (EC:2.3.1.179 2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
fabF2; 3-oxoacyl-ACP synthase (EC:2.3.1.179 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBF7_9BACT rbh
13_1_20cm_4_scaffold_6522_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

1291..1998
DNA (708bp) protein (236aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBF8_9BACT
13_1_20cm_4_scaffold_6522_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

2061..2276
DNA (216bp) protein (72aa)
ppiA; peptidylprolyl isomerase (EC:5.2.1.8) Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
13_1_20cm_4_scaffold_6522_4
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

2314..2517
DNA (204bp) protein (68aa)
ppiA; peptidylprolyl isomerase (EC:5.2.1.8) Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
ppi; putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase id=4815955 bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
13_1_20cm_4_scaffold_6522_5
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

2572..3159
DNA (588bp) protein (196aa)
ppiA; peptidylprolyl isomerase (EC:5.2.1.8) Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
ppiA; peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBF9_9BACT
13_1_20cm_4_scaffold_6522_6
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(3282..3605)
DNA (324bp) protein (108aa)
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
13_1_20cm_4_scaffold_6522_7
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(3642..4337)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBG6_9BACT rbh
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein rbh
13_1_20cm_4_scaffold_6522_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(4334..5275)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBG7_9BACT rbh
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_20cm_4_scaffold_6522_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

5491..6351
DNA (861bp) protein (287aa)
folD; bifunctional 5,10 methylene-tetrahydrofolate dehydrogenase/cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBG8_9BACT rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_20cm_4_scaffold_6522_10
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

6513..7403
DNA (891bp) protein (297aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20) Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBG9_9BACT rbh
13_1_20cm_4_scaffold_6522_11
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

7400..8191
DNA (792bp) protein (264aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBH0_9BACT rbh
13_1_20cm_4_scaffold_6522_12
unknown

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8216..8440
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_20cm_4_scaffold_6522_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(8525..9085)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBH1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK40580.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_4_scaffold_6522_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9061..9873)
DNA (813bp) protein (271aa)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000313|EMBL:CBK40581.1}; EC=3.6.1.41 {ECO:0000313|EMBL:CBK40581.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; N
apaH; bis(5'-nucleosyl)-tetraphosphatase (EC:3.6.1.41)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBH2_9BACT rbh
13_1_20cm_4_scaffold_6522_15
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(9920..10084)
DNA (165bp) protein (55aa)
queF; NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.13); K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
queF; NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBH8_9BACT
13_1_20cm_4_scaffold_6522_16
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(10408..10656)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBH9_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_20cm_4_scaffold_6522_17
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

11072..11974
DNA (903bp) protein (301aa)
forB; 2-oxoglutarate:ferredoxin oxidoredutase subunit beta (EC:1.2.7.3); K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
forB; 2-oxoglutarate:ferredoxin oxidoredutase subunit beta (EC:1.2.7.3)
2-oxoglutarate:ferredoxin oxidoredutase beta subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBI0_9BACT rbh
13_1_20cm_4_scaffold_6522_18
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

11998..12711
DNA (714bp) protein (238aa)
forC; 2-oxoglutarate:ferredoxin oxidoredutase subunit gamma (EC:1.2.7.3); K00172 pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
forC; 2-oxoglutarate:ferredoxin oxidoredutase subunit gamma (EC:1.2.7.3)
2-oxoglutarate:ferredoxin oxidoredutase gamma subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBI1_9BACT rbh
13_1_20cm_4_scaffold_6522_19
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

12738..13070
DNA (333bp) protein (111aa)
forE; 2-oxoglutarate:ferredoxin oxidoreductase aubunit epsilon (EC:1.2.7.3) Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
forE; 2-oxoglutarate:ferredoxin oxidoreductase aubunit epsilon (EC:1.2.7.3)
2-oxoglutarate:ferredoxin oxidoreductase epsilon subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBI2_9BACT
13_1_20cm_4_scaffold_6522_20
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

13092..13847
DNA (756bp) protein (252aa)
forD; 2-oxoglutarate:ferredoxin oxidoredutase subunit delta (EC:1.2.7.3) Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
forD; 2-oxoglutarate:ferredoxin oxidoredutase subunit delta (EC:1.2.7.3)
2-oxoglutarate:ferredoxin oxidoredutase delta subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBI3_9BACT rbh
13_1_20cm_4_scaffold_6522_21
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

13890..15113
DNA (1224bp) protein (408aa)
forA; 2-oxoglutarate:ferredoxin oxidoredutase subunit alpha (EC:1.2.7.3); K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
forA; 2-oxoglutarate:ferredoxin oxidoredutase subunit alpha (EC:1.2.7.3)
2-oxoglutarate:ferredoxin oxidoredutase alpha subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBI4_9BACT
13_1_20cm_4_scaffold_6522_22
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(15265..15513)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBI5_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_20cm_4_scaffold_6522_23
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

15552..15920
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B73811
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
Displaying 23 items

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