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13_1_20cm_4_scaffold_860

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Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_860_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1..1728
DNA (1728bp) protein (576aa)
DNA gyrase, B subunit (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA gyrase subunit B n=1 Tax=Thermincola potens (strain JR) RepID=D5X8C5_THEPJ id=5103759 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA gyrase subunit B
13_1_20cm_4_scaffold_860_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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1736..4228
DNA (2493bp) protein (831aa)
DNA gyrase subunit A n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T936_9EURY
DNA gyrase subunit A Tax=RBG_16_Euryarchaeota_67_27_curated
DNA gyrase subunit A
13_1_20cm_4_scaffold_860_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4251..5312)
DNA (1062bp) protein (354aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TRI6_DESML
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
13_1_20cm_4_scaffold_860_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(5438..6130)
DNA (693bp) protein (231aa)
nth; endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RYU8_CENSY
13_1_20cm_4_scaffold_860_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(6147..7433)
DNA (1287bp) protein (429aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RBG_16_Euryarchaeota_68_13_curated
FolC bifunctional protein id=4656112 bin=GWC2_Nitrospirae-rel_56_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
FolC bifunctional protein
13_1_20cm_4_scaffold_860_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(7490..7858)
DNA (369bp) protein (123aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_4_scaffold_860_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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8044..9249
DNA (1206bp) protein (402aa)
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:6.3.2.5) Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003607A38
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
13_1_20cm_4_scaffold_860_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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9233..9964
DNA (732bp) protein (244aa)
putative archaeal kinase (sugar kinase superfamily); K06982 pantoate kinase [EC:2.7.1.169] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
GHMP kinase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQF7_HALUD
GHMP kinase
13_1_20cm_4_scaffold_860_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(9965..10249)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Euryarchaeota RepID=M9S980_9EURY
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_860_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(10295..11788)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T883_9EURY rbh
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_20cm_4_scaffold_860_11
unknown

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11872..12099
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_20cm_4_scaffold_860_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(12059..12691)
DNA (633bp) protein (211aa)
tmk; thymidylate kinase (EC:2.7.4.9) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Probable thymidylate kinase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U314_9EURY
thymidylate kinase
13_1_20cm_4_scaffold_860_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(13367..14137)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003780B74
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_20cm_4_scaffold_860_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(14152..17052)
DNA (2901bp) protein (967aa)
pyruvate, phosphate dikinase; K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase id=4786406 bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_20cm_4_scaffold_860_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(17120..17656)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C4DB5
KH domain protein; K06961 ribosomal RNA assembly protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RNA-processing protein
13_1_20cm_4_scaffold_860_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(17614..18297)
DNA (684bp) protein (228aa)
Putative Serine/threonine protein kinase involved in cell cycle control (EC:2.7.11.1); K07178 RIO kinase 1 [EC:2.7.11.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037337F6
Kinase RIO1 family protein
13_1_20cm_4_scaffold_860_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(18344..18649)
DNA (306bp) protein (102aa)
Translation initiation factor 1A n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YMR8_9EURY
translation initiation factor 1A (aeIF-1A) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
translation initiation factor 1A (aeIF-1A)
13_1_20cm_4_scaffold_860_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18692..19528)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003718A44
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_860_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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19724..20509
DNA (786bp) protein (262aa)
UDP diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=RBG_16_Euryarchaeota_68_13_curated
UDP diphosphate synthase (EC:2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAC9_ACIB4
13_1_20cm_4_scaffold_860_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(20623..21114)
DNA (492bp) protein (164aa)
Putative uncharacterized protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
Putative uncharacterized protein id=5241273 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_20cm_4_scaffold_860_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(21218..21505)
DNA (288bp) protein (96aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_860_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(21502..22173)
DNA (672bp) protein (224aa)
hypothetical protein; K03151 thiamine biosynthesis protein ThiI Tax=RBG_16_Euryarchaeota_67_27_curated
thiamine biosynthesis protein ThiI
thiamine biosynthesis/tRNA modification protein ThiI; K03151 thiamine biosynthesis protein ThiI id=5241324 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_20cm_4_scaffold_860_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(22175..23185)
DNA (1011bp) protein (337aa)
Putative molybdopterin biosynthesis MoeB protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L075_THERP
putative molybdopterin biosynthesis MoeB protein; K11996 adenylyltransferase and sulfurtransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative molybdopterin biosynthesis MoeB protein
13_1_20cm_4_scaffold_860_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(23241..23405)
DNA (165bp) protein (55aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_860_25
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(23509..24270)
DNA (762bp) protein (254aa)
RNA-binding protein, containing S1 domain n=2 Tax=Euryarchaeota RepID=M9SH91_9EURY
RNA-binding protein, containing S1 domain Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RNA-binding protein, containing S1 domain
13_1_20cm_4_scaffold_860_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(24318..24965)
DNA (648bp) protein (216aa)
Methyltransferase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9N1_METCZ
methyltransferase small; K07579 putative methylase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
methyltransferase
13_1_20cm_4_scaffold_860_27
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(24950..25756)
DNA (807bp) protein (269aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
small GTP-binding protein
13_1_20cm_4_scaffold_860_28
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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25958..26077
DNA (120bp) protein (40aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_860_29
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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26146..26973
DNA (828bp) protein (276aa)
cytochrome-c oxidase (EC:1.9.3.1)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036276F7
cytochrome C oxidase subunit I Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_860_30
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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26982..27287
DNA (306bp) protein (102aa)
Putative Cytochrome c oxidase, subunit IV id=4885221 bin=GWC2_Methylomirabilis_70_24 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying items 1-30 of 53 in total

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