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13_1_20cm_4_scaffold_94

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_94_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..1191)
DNA (1191bp) protein (397aa)
Phosphopantothenoylcysteine decarboxylase Phosphopantothenate-cysteine ligase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJA2_THEM7
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:AHG90856.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS7
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase
13_1_20cm_4_scaffold_94_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1191..1403)
DNA (213bp) protein (71aa)
Putative RNA polymerase omega subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A920_GEMAT
rpoZ; putative RNA polymerase omega subunit Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpoZ; putative RNA polymerase omega subunit
13_1_20cm_4_scaffold_94_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1403..2089)
DNA (687bp) protein (229aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Guanylate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A921_GEMAT
Guanylate kinase
13_1_20cm_4_scaffold_94_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2086..2391)
DNA (306bp) protein (102aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14632839 bin=bin9_gal15 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
Conserved hypothetical protein CHP00255
13_1_20cm_4_scaffold_94_5
unknown

Not on your lists

2558..2845
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_20cm_4_scaffold_94_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2884..4563)
DNA (1680bp) protein (560aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_94_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4560..6059)
DNA (1500bp) protein (500aa)
pepA; cytosol aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Probable cytosol aminopeptidase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWY8_RUBXD
cytosol aminopeptidase
13_1_20cm_4_scaffold_94_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6052..7254)
DNA (1203bp) protein (401aa)
icd; isocitrate dehydrogenase, nADP-dependent; K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=RBG_16_Gemmatimonadetes_66_8_curated
icd; isocitrate dehydrogenase, nADP-dependent; K00031 isocitrate dehydrogenase [EC:1.1.1.42] id=14424435 bin=bin1_lowGC species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
isocitrate dehydrogenase, NADP-dependent
13_1_20cm_4_scaffold_94_9
unknown

Not on your lists

7324..7662
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_20cm_4_scaffold_94_10
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

7705..8763
DNA (1059bp) protein (353aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
13_1_20cm_4_scaffold_94_11
unknown

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8777..9328
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_20cm_4_scaffold_94_12
unknown

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9325..9879
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_20cm_4_scaffold_94_13
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9912..10364
DNA (453bp) protein (151aa)
Putative hemagglutinin/hemolysin-related protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VE1_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE72161.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
peptidase families s8 and s53 domain-containing protein
13_1_20cm_4_scaffold_94_14
unknown

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comp(10386..10745)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_20cm_4_scaffold_94_trna_1
unknown

Not on your lists

comp(10876..10958)
DNA (83bp)
transferRNA
13_1_20cm_4_scaffold_94_15
unknown

Not on your lists

11191..11643
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_20cm_4_scaffold_94_16
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(11645..12178)
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=RBG_16_Acidobacteria_68_9_curated
13_1_20cm_4_scaffold_94_17
unknown

Not on your lists

comp(12178..12597)
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_20cm_4_scaffold_94_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12594..13145)
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A927_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase ECF-type sigma factor
13_1_20cm_4_scaffold_94_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13270..13863
DNA (594bp) protein (198aa)
transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
TetR-family transcriptional regulator id=1804082 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TetR family transcriptional regulator
13_1_20cm_4_scaffold_94_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13870..14685
DNA (816bp) protein (272aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17) Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1I7_9BACT
13_1_20cm_4_scaffold_94_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14682..16109
DNA (1428bp) protein (476aa)
NAD-dependent aldehyde dehydrogenase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Aldehyde Dehydrogenase id=1250363 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
NAD-dependent aldehyde dehydrogenase
13_1_20cm_4_scaffold_94_22
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

16106..17290
DNA (1185bp) protein (395aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RI8_SYMTH
13_1_20cm_4_scaffold_94_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17290..18045
DNA (756bp) protein (252aa)
Enoyl-CoA hydratase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J3R0_9PROT
enoyl-CoA hydratase/isomerase Tax=RBG_16_Gemmatimonadetes_66_8_curated
phenylacetate degradation, enoyl-CoA hydratase paaB
13_1_20cm_4_scaffold_94_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18045..19169
DNA (1125bp) protein (375aa)
PhaF protein; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Benzoyl-CoA oxygenase component B id=1975393 bin=GWD2_Deltaproteobacteria_55_8 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
benzoyl-CoA oxygenase subunit beta
13_1_20cm_4_scaffold_94_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19166..19861
DNA (696bp) protein (232aa)
glycerophosphoryl diester phosphodiesterase family protein; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A928_GEMAT
glycerophosphoryl diester phosphodiesterase
13_1_20cm_4_scaffold_94_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19858..20715
DNA (858bp) protein (286aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTX8_HALO1
13_1_20cm_4_scaffold_94_27
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(20761..22212)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U3T9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH81177.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
13_1_20cm_4_scaffold_94_28
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22616..22882
DNA (267bp) protein (89aa)
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
13_1_20cm_4_scaffold_94_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

22869..23183
DNA (315bp) protein (105aa)
PemK-like protein; K07171 mRNA interferase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PemK-like protein; K07171 mRNA interferase [EC:3.1.-.-] id=14627770 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Displaying items 1-30 of 34 in total

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