ggKbase home page

13_1_40cm_scaffold_1367

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1367_1
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(3..986)
DNA (984bp) protein (328aa)
pcu:pc0938 hypothetical protein id=133391 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:KKT43892.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
NHL repeat-containing protein
13_1_40cm_scaffold_1367_2
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(983..2320)
DNA (1338bp) protein (446aa)
Uncharacterized protein (Fragment) n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6JEP7_STRNV
Uncharacterized protein {ECO:0000313|EMBL:KJK11095.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
13_1_40cm_scaffold_1367_3
unknown

Not on your lists

comp(2697..2984)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_scaffold_1367_4
unknown

Not on your lists

3329..3490
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_scaffold_1367_5
Toxoplasma gondii, Toxoplasma, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(3832..4722)
DNA (891bp) protein (297aa)
Uncharacterized protein {ECO:0000313|EMBL:KFH00808.1}; TaxID=933077 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma.;" source=
13_1_40cm_scaffold_1367_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4800..6617)
DNA (1818bp) protein (606aa)
aldehyde ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aldehyde ferredoxin oxidoreductase id=3789300 bin=GWA2_Methylomirabilis_73_35 species=halophilic archaeon DL31 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1367_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6620..9604)
DNA (2985bp) protein (995aa)
h16_A0376; O-linked N-acetylglucosamine transferase OGT (EC:2.-.-.-)
Lytic transglycosylase id=3789302 bin=GWA2_Methylomirabilis_73_35 species=Danio rerio genus=Danio taxon_order=Cypriniformes taxon_class=Actinopterygii phylum=Chordata tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uncharacterized LOC100535581 Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_1367_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9601..10974)
DNA (1374bp) protein (458aa)
Outer membrane assembly lipoprotein YfiO id=3789304 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
outer membrane assembly lipoprotein YfiO Tax=GWA2_Rokubacteria_73_35_curated
outer membrane assembly lipoprotein YfiO
13_1_40cm_scaffold_1367_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11014..11688
DNA (675bp) protein (225aa)
phosphatase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HAD-superfamily hydrolase, subfamily IA, variant 3 id=3789308 bin=GWA2_Methylomirabilis_73_35 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphatase
13_1_40cm_scaffold_1367_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11685..12947
DNA (1263bp) protein (421aa)
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain id=14626262 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain
13_1_40cm_scaffold_1367_11
unknown

Not on your lists

13001..13654
DNA (654bp) protein (218aa)

This feature has no annotations

13_1_40cm_scaffold_1367_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13733..14857
DNA (1125bp) protein (375aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=14626264 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
D-alanine--D-alanine ligase (EC:6.3.2.4)
13_1_40cm_scaffold_1367_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14940..16055
DNA (1116bp) protein (372aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase id=3979811 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1367_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16102..16746)
DNA (645bp) protein (215aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3979808 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1367_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16823..17779
DNA (957bp) protein (319aa)
ABC transporter substrate-binding protein
Extracellular solute-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ssuA; sulfonate/nitrate/taurine transport system substrate-binding protein id=14626267 bin=bin7_NC10_sister species=Burkholderia sp. WSM4176 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_1367_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17760..18317)
DNA (558bp) protein (186aa)
maf protein; K06287 septum formation protein Tax=GWA2_Rokubacteria_73_35_curated
MAF protein id=3979804 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
maf protein
13_1_40cm_scaffold_1367_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18335..18598)
DNA (264bp) protein (88aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3979802 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1367_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18612..19472)
DNA (861bp) protein (287aa)
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16) id=14626269 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16)
13_1_40cm_scaffold_1367_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(19529..19852)
DNA (324bp) protein (108aa)
putative s-adenosylmethionine decarboxylase; K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] Tax=GWA2_Rokubacteria_73_35_curated
S-adenosylmethionine decarboxylase (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme id=3979797 bin=GWA2_Methylomirabilis_73_35 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 19 items

View Taxonomy