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13_1_40cm_scaffold_1551

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1551_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(2..277)
DNA (276bp) protein (92aa)
mgtE; magnesium transporter; K06213 magnesium transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Mg/Co/Ni transporter; K06213 magnesium transporter id=12555897 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_1551_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(332..1282)
DNA (951bp) protein (317aa)
GTPase Era n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WVC4_KYRT2
era; GTP-binding protein Era; K03595 GTP-binding protein Era Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
GTP-binding protein Era
13_1_40cm_scaffold_1551_3
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(1266..1772)
DNA (507bp) protein (169aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acido
Endoribonuclease YbeY n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIW5_9BACT
metalloprotein
13_1_40cm_scaffold_1551_4
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(1760..4108)
DNA (2349bp) protein (783aa)
Membrane-associated metal-dependent phosphohydrolase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A576_PELCD
membrane-associated metal-dependent phosphohydrolase
HD superfamily hydrolase; K07037 Tax=RBG_13_Acidobacteria_68_16_curated
13_1_40cm_scaffold_1551_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4105..5136)
DNA (1032bp) protein (344aa)
PhoH-like protein; K06217 phosphate starvation-inducible protein PhoH and related proteins Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
id=12555892 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phoL; phoH-like protein
13_1_40cm_scaffold_1551_6
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists


comp(5263..6279)
DNA (1017bp) protein (339aa)
aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
aspS; Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase (Aspartate-/asparagine-tRNA ligase) (AspRS) (EC:6.1.1.22 6.1.1.12)
Aspartate--tRNA ligase id=4557257 bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_scaffold_1551_7
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6279..6995)
DNA (717bp) protein (239aa)
aspS; Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase (Aspartate-/asparagine-tRNA ligase) (AspRS) (EC:6.1.1.22 6.1.1.12)
aspartyl-tRNA synthase n=1 Tax=Desulfurispora thermophila RepID=UPI000367DC3A
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KJS17304.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
13_1_40cm_scaffold_1551_8
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(6988..8175)
DNA (1188bp) protein (396aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
hisS; putative histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKH5_9FIRM
13_1_40cm_scaffold_1551_9
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8344..9621
DNA (1278bp) protein (426aa)
pyrrolo-quinoline quinone n=1 Tax=Salisaeta longa RepID=UPI0003B32839
PGF-CTERM archaeal protein-sorting signal {ECO:0000313|EMBL:ERH02397.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp
PGF-CTERM archaeal protein-sorting signal
13_1_40cm_scaffold_1551_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(9649..10710)
DNA (1062bp) protein (354aa)
isocitrate dehydrogenase (EC:1.1.1.41) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK65_SORCE
13_1_40cm_scaffold_1551_11
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10707..11081)
DNA (375bp) protein (125aa)
Glutaredoxin-like protein n=1 Tax=Frankia sp. QA3 RepID=I8QVT0_9ACTO
Glutaredoxin-like protein {ECO:0000313|EMBL:EIV94229.1}; Flags: Precursor;; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
redoxin
13_1_40cm_scaffold_1551_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(11078..11470)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIJ0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_scaffold_1551_13
unknown

Not on your lists

comp(11470..11649)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_scaffold_1551_14
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(11649..12125)
DNA (477bp) protein (159aa)
hypothetical protein n=2 Tax=unclassified Aminicenantes RepID=UPI0003B3607B
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
hypothetical protein
13_1_40cm_scaffold_1551_15
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists


comp(12130..12312)
DNA (183bp) protein (61aa)
50S ribosomal protein L9 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XY91_9BACT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
50S ribosomal protein L9
13_1_40cm_scaffold_1551_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


comp(12541..12825)
DNA (285bp) protein (95aa)
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=12555613 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsR; 30S ribosomal protein S18
13_1_40cm_scaffold_1551_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


comp(12845..13213)
DNA (369bp) protein (123aa)
30S ribosomal protein S6 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0S5_9BACT
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
rpsF; 30S ribosomal protein S6
13_1_40cm_scaffold_1551_18
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(13233..13826)
DNA (594bp) protein (198aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJA4_CHLTF
13_1_40cm_scaffold_1551_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(13849..14583)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036D43A4
50S ribosomal protein L25P; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
50S ribosomal protein L25
13_1_40cm_scaffold_1551_20
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(14690..15628)
DNA (939bp) protein (313aa)
ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Ribose-phosphate pyrophosphokinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHW0_KORVE
ribose-phosphate pyrophosphokinase
13_1_40cm_scaffold_1551_trna_1
unknown

Not on your lists

comp(15685..15755)
DNA (71bp)
transferRNA
13_1_40cm_scaffold_1551_21
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(15783..16148)
DNA (366bp) protein (122aa)
Putative septation protein SpoVG n=2 Tax=Anaeromyxobacter RepID=SP5G_ANAD2
SpoVG family protein; K06412 stage V sporulation protein G Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
regulatory protein SpoVG
13_1_40cm_scaffold_1551_22
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16185..16982)
DNA (798bp) protein (266aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=S_Thermoanaerobacterales_50_218
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase id=3820176 bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1551_23
unknown

Not on your lists

comp(17075..17926)
DNA (852bp) protein (284aa)

This feature has no annotations

13_1_40cm_scaffold_1551_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(17923..19890)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZK70_TERRK
TPR repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_scaffold_1551_25
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(19887..21392)
DNA (1506bp) protein (502aa)
Serine/threonine protein kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II42_KORVE
Uncharacterized protein {ECO:0000313|EMBL:KDA54101.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
serine/threonine protein kinase
13_1_40cm_scaffold_1551_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21582..22202)
DNA (621bp) protein (207aa)
C-terminal processing peptidase {ECO:0000313|EMBL:CDM64773.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CDM64773.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;"
carboxyl-terminal protease (EC:3.4.21.102)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000370977E
Displaying 27 items

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