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13_1_40cm_scaffold_1566

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1566_1
unknown

Not on your lists

266..1711
DNA (1446bp) protein (482aa)

This feature has no annotations

13_1_40cm_scaffold_1566_2
unknown

Not on your lists

1765..2031
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_scaffold_1566_3
unknown

Not on your lists

comp(2110..2442)
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_scaffold_1566_4
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3931..4416)
DNA (486bp) protein (162aa)
Cupin n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R4H0_HALMT
cupin
Cupin {ECO:0000313|EMBL:AHZ21509.1}; Cupin 2 domain-containing protein {ECO:0000313|EMBL:AFK19130.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofer
13_1_40cm_scaffold_1566_5
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4424..4933)
DNA (510bp) protein (170aa)
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
13_1_40cm_scaffold_1566_6
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5185..5601)
DNA (417bp) protein (139aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EI68_METSB
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACK50550.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" s
13_1_40cm_scaffold_1566_7
unknown

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5966..6400
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_scaffold_1566_8
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(6413..7402)
DNA (990bp) protein (330aa)
Putative phosphoesterase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZ62_METPS
phosphoesterase; K06953 Tax=RBG_16_Bathyarchaeota_48_13_curated
putative phosphoesterase
13_1_40cm_scaffold_1566_9
unknown

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7847..7996
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_scaffold_1566_10
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

8026..10848
DNA (2823bp) protein (941aa)
ATP-dependent DNA helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_16_Archaea_50_20_curated
ATP-dependent DNA helicase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSN3_METAC
ATP-dependent DNA helicase
13_1_40cm_scaffold_1566_11
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

10856..11992
DNA (1137bp) protein (379aa)
Single-stranded DNA-binding replication protein A (RPA) n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5L6_METCZ
replication factor A; K07466 replication factor A1 Tax=RBG_16_Archaea_50_20_curated
Single-stranded DNA-binding replication protein A (RPA)
13_1_40cm_scaffold_1566_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

12011..12343
DNA (333bp) protein (111aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_scaffold_1566_13
unknown

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comp(12951..13706)
DNA (756bp) protein (252aa)

This feature has no annotations

13_1_40cm_scaffold_1566_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14040..15386)
DNA (1347bp) protein (449aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19) Tax=RBG_13_Bathyarchaeota_46_16b_curated
4-aminobutyrate aminotransferase (EC:2.6.1.17 2.6.1.11 2.6.1.13)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037E812F
13_1_40cm_scaffold_1566_15
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(15453..15776)
DNA (324bp) protein (108aa)
DNA/RNA-binding protein Alba n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B4R5_ACIHW
DNA/RNA-binding protein AlbA; K03622 archaea-specific DNA-binding protein Tax=RBG_16_Bathyarchaeota_57_9_curated
DNA/RNA-binding protein Alba
13_1_40cm_scaffold_1566_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

15995..16255
DNA (261bp) protein (87aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_scaffold_1566_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

16278..17255
DNA (978bp) protein (326aa)
mRNA 3'-end processing factor n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3Z8_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_1566_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17524..18843)
DNA (1320bp) protein (440aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1) Tax=RBG_13_Bathyarchaeota_46_16b_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY7_NITGG
13_1_40cm_scaffold_1566_19
unknown

Not on your lists

comp(18984..19247)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_scaffold_1566_20
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

19854..21302
DNA (1449bp) protein (483aa)
Drug resistance transporter, EmrB/QacA subfamily n=5 Tax=Thermoanaerobacter RepID=B0K3D4_THEPX
EmrB/QacA family drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EEU62167.1}; Flags: Precursor;; TaxID=589861 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterace
13_1_40cm_scaffold_1566_trna_1
unknown

Not on your lists

comp(21306..21388)
DNA (83bp)
transferRNA
13_1_40cm_scaffold_1566_21
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(21447..22541)
DNA (1095bp) protein (365aa)
phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RBG_16_Bathyarchaeota_57_9_curated
Phosphoglycerate kinase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BEF6_METIK
phosphoglycerate kinase
Displaying 22 items

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