ggKbase home page

13_1_40cm_scaffold_1577

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1577_1
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..300)
DNA (300bp) protein (100aa)
Isoquinoline 1-oxidoreductase beta subunit {ECO:0000313|EMBL:KGM06750.1}; EC=1.3.99.16 {ECO:0000313|EMBL:KGM06750.1};; TaxID=392484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichale
aldehyde dehydrogenase (EC:1.2.99.3)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N267_9GAMM
13_1_40cm_scaffold_1577_2
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(297..764)
DNA (468bp) protein (156aa)
Probable oxidoreductase n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MDF4_BORPB
oxidoreductase
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:KDD50876.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sou
13_1_40cm_scaffold_1577_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(873..1355)
DNA (483bp) protein (161aa)
MOSC domain-containing protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y2T7_9EURY
MOSC domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
MOSC domain-containing protein
13_1_40cm_scaffold_1577_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

1499..2275
DNA (777bp) protein (259aa)
putative NTPase; K06928 nucleoside-triphosphatase THEP1 [EC:3.6.1.15] Tax=RBG_16_Acidobacteria_70_10_curated
id=14626798 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
putative NTPase
13_1_40cm_scaffold_1577_5
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2208..2501)
DNA (294bp) protein (98aa)
Putative nucleotidyltransferase n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LVN0_9CHRO
nucleotidyltransferase; K07075 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
DNA polymerase subunit beta
13_1_40cm_scaffold_1577_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2989..3834)
DNA (846bp) protein (282aa)
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
13_1_40cm_scaffold_1577_7
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4300..6639)
DNA (2340bp) protein (780aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HZX8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS14706.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp.
hypothetical protein
13_1_40cm_scaffold_1577_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6945..7130
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TN98_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDX21821.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
13_1_40cm_scaffold_1577_9
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

7178..7972
DNA (795bp) protein (265aa)
zinc metalloprotease (EC:3.4.24.-); K06974 Tax=GWC2_Nitrospirae_57_9_curated
hypothetical protein; K06974 id=1250605 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
13_1_40cm_scaffold_1577_10
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7795..8418)
DNA (624bp) protein (208aa)
Transcriptional regulator protein-like protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
Transcriptional regulator protein-like protein id=4357159 bin=GWC2_Chloroflexi_73_18 species=Diplosphaera colitermitum genus=Diplosphaera taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_scaffold_1577_11
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8415..9170)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9Q7_9BACT id=86805 bin=ACD58 species=Diplosphaera colitermitum genus=Diplosphaera taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Putative uncharacterized protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
13_1_40cm_scaffold_1577_12
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9437..11134
DNA (1698bp) protein (566aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF80652.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
13_1_40cm_scaffold_1577_13
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11552..11956
DNA (405bp) protein (135aa)
Tax=GWA2_Ignavibacteria_54_16_curated
13_1_40cm_scaffold_1577_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12188..13609)
DNA (1422bp) protein (474aa)
MFS transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003677251
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43617.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
sugar (and other) transporter family protein
13_1_40cm_scaffold_1577_15
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13679..14350
DNA (672bp) protein (224aa)
Amidohydrolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP25_9PROT
Amidohydrolase {ECO:0000313|EMBL:EDP65107.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
amidohydrolase family protein
13_1_40cm_scaffold_1577_16
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14323..14829
DNA (507bp) protein (169aa)
Amidohydrolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP25_9PROT
Amidohydrolase {ECO:0000313|EMBL:EDP65107.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
amidohydrolase
13_1_40cm_scaffold_1577_17
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14911..15147)
DNA (237bp) protein (79aa)
Methionyl-tRNA formyltransferase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0FYC5_9BRAD
methionyl-tRNA formyltransferase
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:BAL73512.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
13_1_40cm_scaffold_1577_18
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15606..16064)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEF5_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC82963.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_scaffold_1577_19
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(16508..18331)
DNA (1824bp) protein (608aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y2F3_9PROT
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_67_18
13_1_40cm_scaffold_1577_20
unknown

Not on your lists

comp(18432..18992)
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_40cm_scaffold_1577_21
Leeuwenhoekiella blandensis, Leeuwenhoekiella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19557..21884
DNA (2328bp) protein (776aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XNR3_LEEBM
Uncharacterized protein {ECO:0000313|EMBL:EAQ48816.1}; TaxID=398720 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Leeuwenhoekiella.;" source="Leeuwenhoekiella
hypothetical protein
13_1_40cm_scaffold_1577_22
Leeuwenhoekiella blandensis, Leeuwenhoekiella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21881..23062
DNA (1182bp) protein (394aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=398720 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Leeu
site-specific DNA-methyltransferase (EC:2.1.1.72)
Type II R/M system n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XNR2_LEEBM
13_1_40cm_scaffold_1577_23
unknown

Not on your lists

24029..24172
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 23 items

View Taxonomy