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13_1_40cm_scaffold_179

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_179_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1..108)
DNA (108bp) protein (36aa)
30S ribosomal protein S12 n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AGW2_SEBTE
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=GWC2_Gemmatimonadetes_71_10_curated
30S ribosomal protein S12
13_1_40cm_scaffold_179_2
unknown

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comp(363..920)
DNA (558bp) protein (186aa)

This feature has no annotations

13_1_40cm_scaffold_179_3
unknown

Not on your lists

comp(1640..2263)
DNA (624bp) protein (208aa)

This feature has no annotations

13_1_40cm_scaffold_179_4
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

Not on your lists

comp(2353..6795)
DNA (4443bp) protein (1481aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00037DB326
YD repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
RHS repeat-associated core domain-containing protein
13_1_40cm_scaffold_179_5
unknown

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comp(7515..8099)
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_40cm_scaffold_179_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8056..13716)
DNA (5661bp) protein (1887aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD40_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40417.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_scaffold_179_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13839..14792)
DNA (954bp) protein (318aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI74_ANADF
sigma-54 dependent trancsriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS28420.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobac
13_1_40cm_scaffold_179_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14789..16300)
DNA (1512bp) protein (504aa)
Putative general secretion pathway protein D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7C5_GEMAT
gspD; putative general secretion pathway protein D precursor
Putative general secretion pathway protein D {ECO:0000313|EMBL:BAH38135.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
13_1_40cm_scaffold_179_9
unknown

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comp(16291..16776)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_scaffold_179_10
unknown

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comp(16773..17369)
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_40cm_scaffold_179_11
unknown

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comp(17491..18489)
DNA (999bp) protein (333aa)

This feature has no annotations

13_1_40cm_scaffold_179_12
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18629..19513)
DNA (885bp) protein (295aa)
hypothetical protein
General secretion pathway protein K id=2213233 bin=GWB2_Proteobacteria_55_19 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
General secretion pathway protein K; K02460 general secretion pathway protein K Tax=GWB2_Deltaproteobacteria_55_19_curated
13_1_40cm_scaffold_179_13
unknown

Not on your lists

comp(19510..20082)
DNA (573bp) protein (191aa)

This feature has no annotations

13_1_40cm_scaffold_179_14
unknown

Not on your lists

comp(20072..20428)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_scaffold_179_15
unknown

Not on your lists

comp(20415..20678)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_scaffold_179_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20727..21686)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00037634D2
Type II secretion system F domain-containing protein
Type II secretion system F domain-containing protein {ECO:0000313|EMBL:AHG91939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_179_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21823..22266)
DNA (444bp) protein (148aa)
Putative general secretion pathway protein G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E0_GEMAT
general secretion pathway protein G
General secretion pathway protein G {ECO:0000313|EMBL:AHG93842.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_179_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22250..23743)
DNA (1494bp) protein (498aa)
Putative General secretion pathway protein E (Type II traffic warden ATPase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJH7_9BACT
General secretion pathway protein E (Type II traffic warden ATPase) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
General secretion pathway protein E (Type II traffic warden ATPase)
13_1_40cm_scaffold_179_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23997..24959)
DNA (963bp) protein (321aa)
Fis family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002630A4B
Sphingomonas taxi strain 30a NODE_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28106.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
two-component system response regulator
13_1_40cm_scaffold_179_20
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(25243..25404)
DNA (162bp) protein (54aa)
hypothetical protein id=14628446 bin=bin8_Chloro species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein Tax=CSP1_4_Chloroflexi
twitching motility protein PilT
Displaying 20 items

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