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13_1_40cm_scaffold_1921

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1921_1
unknown

Not on your lists

2..70
DNA (69bp) protein (23aa)

This feature has no annotations

13_1_40cm_scaffold_1921_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(87..599)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K7B5_9RHOB
class III aminotransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_scaffold_1921_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(596..1279)
DNA (684bp) protein (228aa)
aminotransferase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, probable n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RRU4_XANCB
class III aminotransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_1921_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1696..2880
DNA (1185bp) protein (395aa)
Putative uncharacterized protein id=4814777 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_scaffold_1921_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3157..4044
DNA (888bp) protein (296aa)
2,4-dichlorophenoxyacetate dioxygenase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXS2_9BURK
taurine catabolism dioxygenase tauD/tfdA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
taurine catabolism dioxygenase tauD/tfdA
13_1_40cm_scaffold_1921_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4179..5222
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003718233
Uncharacterized protein {ECO:0000313|EMBL:ETX09304.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hydroxylase
13_1_40cm_scaffold_1921_7

Not on your lists

comp(5255..5722)
DNA (468bp) protein (156aa)
Marine sediment metagenome DNA, contig: S01H1_S25358 {ECO:0000313|EMBL:GAG32372.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
id=4223230 bin=GWF2_OP3_43_52 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
13_1_40cm_scaffold_1921_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5890..6600)
DNA (711bp) protein (237aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=1746145 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
toluene tolerance family protein
13_1_40cm_scaffold_1921_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6702..7970)
DNA (1269bp) protein (423aa)
pobA; iron-sulfur protein (EC:1.14.12.-)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003775FFC
Uncharacterized protein {ECO:0000313|EMBL:ETX06272.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_scaffold_1921_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8324..8530)
DNA (207bp) protein (69aa)
id=4485920 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_scaffold_1921_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8894..9169
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF02558.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
13_1_40cm_scaffold_1921_12
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

9226..10491
DNA (1266bp) protein (422aa)
Putative uncharacterized protein id=3838785 bin=GWC2_Nitrospirae_57_13 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
13_1_40cm_scaffold_1921_13
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

10473..11696
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI0003669E5E
hypothetical protein Tax=GWC2_Nitrospirae_57_9_curated
FAD dependent oxidoreductase
13_1_40cm_scaffold_1921_14
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

11693..13120
DNA (1428bp) protein (476aa)
menE; 2-succinylbenzoate-CoA ligase MenE (EC:6.2.1.26) Tax=GWC2_Nitrospirae_57_13_curated
Putative uncharacterized protein id=3838777 bin=GWC2_Nitrospirae_57_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
acyl-CoA synthetase
13_1_40cm_scaffold_1921_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13117..14397
DNA (1281bp) protein (427aa)
Monooxygenase FAD-binding n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW95_9BACT
Monooxygenase FAD-binding {ECO:0000313|EMBL:EDY21687.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
tryptophan halogenase
13_1_40cm_scaffold_1921_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14407..15183)
DNA (777bp) protein (259aa)
methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ubiquinone/menaquinone biosynthesis methlytransferase UbiE (EC:2.1.1.-)
Ubiquinone/menaquinone biosynthesis methlytransferase UbiE n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PFI6_CELJU
13_1_40cm_scaffold_1921_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15329..16426
DNA (1098bp) protein (366aa)
alcohol dehydrogenase class III; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Alcohol dehydrogenase class III id=2304937 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase class III
13_1_40cm_scaffold_1921_18
unknown

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comp(16417..16743)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_scaffold_1921_19
unknown

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comp(16716..17393)
DNA (678bp) protein (226aa)

This feature has no annotations

13_1_40cm_scaffold_1921_20
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17506..17979)
DNA (474bp) protein (158aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INC5_ANADE
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABC80305.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacter
13_1_40cm_scaffold_1921_21
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18089..18841)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DQC5_BRAJP
GntR family transcriptional regulator {ECO:0000313|EMBL:KGT78533.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrh
hypothetical protein
13_1_40cm_scaffold_1921_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18957..20405
DNA (1449bp) protein (483aa)
Putative uncharacterized protein id=3703499 bin=GWF2_Methylomirabilis_70_14 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_scaffold_1921_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

20414..21415
DNA (1002bp) protein (334aa)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=GWA2_Rokubacteria_70_23_curated
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase id=3703501 bin=GWF2_Methylomirabilis_70_14 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1921_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21412..22905
DNA (1494bp) protein (498aa)
methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] Tax=GWA2_Rokubacteria_70_23_curated
methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] id=14628051 bin=bin7_NC10_sister species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
methylenetetrahydrofolate reductase
13_1_40cm_scaffold_1921_25
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22902..23930
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI000376103C
dctP; TRAP system periplasmic protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
TRAP dicarboxylate transporter, DctP subunit
13_1_40cm_scaffold_1921_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23927..24415
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNG0_9PROT
tripartite AtP-independent periplasmic transporter subunit DctQ Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
hypothetical protein
13_1_40cm_scaffold_1921_27
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24457..25719
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=uncultured alpha proteobacterium EB080_L84F03 RepID=E0Y1K1_9PROT
TRAP transporter, DctM subunit Tax=RBG_13_Deltaproteobacteria_53_10_curated
TRAP dicarboxylate transporter subunit DctM
13_1_40cm_scaffold_1921_28
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25745..25939
DNA (195bp) protein (65aa)
TRAP dicarboxylate transporter subunit DctM Tax=RBG_16_Betaproteobacteria_64_18_curated
13_1_40cm_scaffold_1921_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(26246..26671)
DNA (426bp) protein (142aa)
NikR; nickel responsive regulator; K07722 CopG family transcriptional regulator, nickel-responsive regulator Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative nickel-responsive regulator id=4334545 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
nickel-responsive regulator
13_1_40cm_scaffold_1921_30
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

26726..28798
DNA (2073bp) protein (691aa)
Putative TonB-dependent receptor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB50_9BACT
putative TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative TonB-dependent receptor
Displaying items 1-30 of 43 in total

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