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13_1_40cm_scaffold_1958

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1958_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1..567
DNA (567bp) protein (189aa)
hypothetical protein id=14626968 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_1958_2
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(574..681)
DNA (108bp) protein (36aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadac
13_1_40cm_scaffold_1958_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1069..1764
DNA (696bp) protein (232aa)
binding-protein-dependent transporters inner membrane component; K05773 tungstate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type tungstate transport permease protein id=2315318 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tungstate ABC transporter permease
13_1_40cm_scaffold_1958_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1821..2588
DNA (768bp) protein (256aa)
molybdenum ABC transporter molybdenum-binding protein; K02020 molybdate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative ABC transporter substrate binding protein; K02020 molybdate transport system substrate-binding protein id=14626699 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative ABC transporter substrate binding protein
13_1_40cm_scaffold_1958_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2596..3249
DNA (654bp) protein (218aa)
ABC transporter permease; K02018 molybdate transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter permease; K02018 molybdate transport system permease protein id=14626700 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
13_1_40cm_scaffold_1958_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3252..4379
DNA (1128bp) protein (376aa)
putative ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative ABC transporter ATP-binding protein id=2315314 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter ATP-binding protein
13_1_40cm_scaffold_1958_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4376..5467
DNA (1092bp) protein (364aa)
Tungsten transporter ATP binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tungsten transporter ATP binding protein id=2315313 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tungsten transporter ATP binding protein
13_1_40cm_scaffold_1958_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5508..5951
DNA (444bp) protein (148aa)
arsC; protein arsC (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase) (EC:1.20.4.- 3.1.3.48) Tax=GWA2_Rokubacteria_73_35_curated
arsC; protein arsC (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase) (EC:1.20.4.- 3.1.3.48) id=14625217 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
arsC; protein arsC (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase) (EC:1.20.4.- 3.1.3.48)
13_1_40cm_scaffold_1958_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5973..7199
DNA (1227bp) protein (409aa)
MIP family protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTD4_SORCE
MIP family protein
MIP family protein {ECO:0000313|EMBL:AGP33848.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellul
13_1_40cm_scaffold_1958_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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7278..7505
DNA (228bp) protein (76aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4367885 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1958_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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7571..8002
DNA (432bp) protein (144aa)
moaC; molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdenum cofactor biosynthesis protein C id=3639795 bin=GWC2_Methylomirabilis_70_24 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
moaC; molybdenum cofactor biosynthesis protein C
13_1_40cm_scaffold_1958_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8073..9263
DNA (1191bp) protein (397aa)
histone deacetylase/AcuC/AphA family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
histone deacetylase/AcuC/AphA family protein id=14626707 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
histone deacetylase/AcuC/AphA family protein
13_1_40cm_scaffold_1958_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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9354..11543
DNA (2190bp) protein (730aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) id=4183572 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
otsA; trehalose-6-phosphate synthase
13_1_40cm_scaffold_1958_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11603..12316
DNA (714bp) protein (238aa)
beta-phosphoglucomutase hydrolase (EC:2.4.1.216) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Beta-phosphoglucomutase hydrolase id=5032672 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
trehalose phosphatase
13_1_40cm_scaffold_1958_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12352..14142
DNA (1791bp) protein (597aa)
malto-oligosyltrehalose trehalohydrolase; K01236 maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Malto-oligosyltrehalose trehalohydrolase id=5032671 bin=GWA2_Methylomirabilis_73_35 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
malto-oligosyltrehalose trehalohydrolase
13_1_40cm_scaffold_1958_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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14148..17171
DNA (3024bp) protein (1008aa)
maltooligosyl trehalose synthase; K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Maltooligosyl trehalose synthase id=5032670 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
maltooligosyl trehalose synthase
13_1_40cm_scaffold_1958_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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17171..17833
DNA (663bp) protein (221aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Uncharacterized protein id=5032669 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytoplasmic protein
13_1_40cm_scaffold_1958_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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18648..18929
DNA (282bp) protein (94aa)
group 1 glycosyl transferase; K13057 trehalose synthase [EC:2.4.1.245] Tax=GWA2_Rokubacteria_73_35_curated
Glycosyl transferase group 1 id=5032668 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
13_1_40cm_scaffold_1958_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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19683..20099
DNA (417bp) protein (139aa)
glycosyl transferase Tax=GWA2_Rokubacteria_73_35_curated
Glycosyl transferase, family 2 id=5032667 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase
13_1_40cm_scaffold_1958_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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20096..21781
DNA (1686bp) protein (562aa)
trehalose synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Trehalose synthase id=4882695 bin=GWC2_Methylomirabilis_70_24 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
trehalose synthase
13_1_40cm_scaffold_1958_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21756..23246
DNA (1491bp) protein (497aa)
1,4-alpha-glucan branching protein; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
1,4-alpha-glucan branching enzyme GlgB id=4799905 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
trehalose synthase-like protein
Displaying 21 items

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