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13_1_40cm_scaffold_1986

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1986_1
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..518)
DNA (516bp) protein (172aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=GWC2_Deltaproteobacteria_65_14_curated
AMP-dependent synthetase and ligase id=2910441 bin=GWC2_Proteo_65_14_Ab886 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
AMP-dependent synthetase and ligase
13_1_40cm_scaffold_1986_2
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(539..1324)
DNA (786bp) protein (262aa)
ABC transporter related n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQZ1_ROSS1
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=RBG_16_Deltaproteobacteria_49_23_curated
ABC transporter-like protein
13_1_40cm_scaffold_1986_3
unknown

Not on your lists

comp(1331..1435)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_scaffold_1986_4
unknown

Not on your lists

comp(2162..2746)
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_40cm_scaffold_1986_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists

3120..3719
DNA (600bp) protein (200aa)
hypothetical protein id=14429297 bin=bin3_NC10 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_scaffold_1986_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3874..4704
DNA (831bp) protein (277aa)
Putative leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC transporter. [livG] (EC:3.6.3.-)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transport system protein id=4895588 bin=GWC2_Methylomirabilis_70_16 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1986_7
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

4716..5444
DNA (729bp) protein (243aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Thermosynechococcus elongatus (strain BP-1) RepID=Q8DMQ8_THEEB
livF; ABC transporter Tax=RBG_13_Chloroflexi_50_10_curated
branched-chain amino acid ABC transporter ATP-binding protein
13_1_40cm_scaffold_1986_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5581..6795
DNA (1215bp) protein (405aa)
Extracellular ligand-binding receptor n=1 Tax=Nitratireductor indicus C115 RepID=K2P264_9RHIZ
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EKF44194.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="N
ABC transporter substrate-binding protein
13_1_40cm_scaffold_1986_9
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6809..7282
DNA (474bp) protein (158aa)
ABC transporter permease n=1 Tax=Comamonas sp. B-9 RepID=UPI000395D0C0
putative ABC transporter permease protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:AHG65561.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimig
13_1_40cm_scaffold_1986_10
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7264..7581
DNA (318bp) protein (106aa)
Hydrophobic amino acid ABC transporter permease n=1 Tax=Nitratireductor indicus C115 RepID=K2N9J1_9RHIZ
Putative high-affinity branched-chain amino acid transport system permease protein LivH
Putative high-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CCQ73838.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospiril
13_1_40cm_scaffold_1986_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7595..8494
DNA (900bp) protein (300aa)
ABC transporter n=1 Tax=Nitratireductor indicus C115 RepID=K2PSX3_9RHIZ
ABC transporter permease protein {ECO:0000313|EMBL:KFC63460.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative amino acid ABC transporter LivHM family permease protein
13_1_40cm_scaffold_1986_12
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(8542..9963)
DNA (1422bp) protein (474aa)
Beta-lactamase domain protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EQW3_METSB
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
beta-lactamase domain-containing protein
13_1_40cm_scaffold_1986_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10154..11047
DNA (894bp) protein (298aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
Uncharacterized protein {ECO:0000313|EMBL:ETX05897.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
3-hydroxyisobutyrate dehydrogenase id=3352297 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1986_14
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11060..12397)
DNA (1338bp) protein (446aa)
BarH n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2A1_SORCE
putative TIM-barrel fold metal-dependent hydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
BarH
13_1_40cm_scaffold_1986_15
unknown

Not on your lists

comp(12465..12959)
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_scaffold_1986_16
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13226..13843)
DNA (618bp) protein (206aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNS8_9PROT
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:KFN49784.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.
CDP-diacylglycerol/serine O-phosphatidyltransferase
13_1_40cm_scaffold_1986_17
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14526..14999)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Streptomyces viridosporus RepID=UPI0002FE88A5
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFE70975.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATC
13_1_40cm_scaffold_1986_18
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15117..15695)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UKJ7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPR32823.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovi
hypothetical protein
13_1_40cm_scaffold_1986_19
unknown

Not on your lists

comp(15784..15957)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_scaffold_1986_20
unknown

Not on your lists

16360..16644
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_scaffold_1986_21
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16835..18400
DNA (1566bp) protein (522aa)
Putative uncharacterized protein n=1 Tax=uncultured microorganism RepID=E0X6P7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ETX06590.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_scaffold_1986_22
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18834..19826)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PHB6_STRVO
hypothetical protein
Tax=BJP_IG2102_Coriobacteriales_64_17
13_1_40cm_scaffold_1986_23
unknown

Not on your lists

comp(19826..20017)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_scaffold_1986_24
unknown

Not on your lists

comp(20386..20763)
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_scaffold_1986_trna_2
unknown

Not on your lists

comp(20769..20842)
DNA (74bp)
transferRNA
13_1_40cm_scaffold_1986_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20804..21088)
DNA (285bp) protein (95aa)
Integrase family protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X1B9_ACISM
integrase
Site-specific recombinase, phage integrase family Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_1986_26
unknown

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comp(21252..21434)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_scaffold_1986_27
unknown

Not on your lists

comp(21431..21736)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_scaffold_1986_28
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

comp(22188..23576)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B77224
hypothetical protein Tax=CG_CP01_01
hypothetical protein
13_1_40cm_scaffold_1986_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23708..24637)
DNA (930bp) protein (310aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNA polymerase sigma factor id=4853978 bin=GWA2_Methylomirabilis_73_35 species=Selenomonas noxia genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sigA; RNA polymerase sigma factor RpoD
Displaying items 1-30 of 35 in total

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