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13_1_40cm_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_20_1
unknown

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_scaffold_20_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

747..2138
DNA (1392bp) protein (464aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=4781397 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two component sigma54 specific Fis family transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
Fis family transcriptional regulator
13_1_40cm_scaffold_20_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

2153..2692
DNA (540bp) protein (180aa)
Capsule polysaccharide export protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QZN8_9DELT
polysaccharide biosynthesis/export protein; K01991 polysaccharide export outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
polysaccharide export protein
13_1_40cm_scaffold_20_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2733..4364
DNA (1632bp) protein (544aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YJE9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ETX01843.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
chain length determinant protein
13_1_40cm_scaffold_20_5
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

4375..5352
DNA (978bp) protein (326aa)
Peptidoglycan-binding lysin domain-containing protein; K02450 general secretion pathway protein A Tax=RBG_16_Acidobacteria_68_9_curated
Peptidoglycan-binding domain 1 protein id=1993777 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ATPase AAA
13_1_40cm_scaffold_20_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5349..6197
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UDT4_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:ETX09175.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
putative protein-tyrosine kinase
13_1_40cm_scaffold_20_7
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

6339..6890
DNA (552bp) protein (184aa)
Transcription antitermination protein NusG (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BE69_9ZZZZ
NusG antitermination factor Tax=RBG_13_Nitrospirae_41_22_curated
NusG antitermination factor
13_1_40cm_scaffold_20_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6904..8736
DNA (1833bp) protein (611aa)
glucosamine--fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] id=14429085 bin=bin3_NC10 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin3_NC10 organism_group=NC10
glucosamine--fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=CSP1_5_NC10
glmS-1; glucosamine--fructose-6-phosphate aminotransferase
13_1_40cm_scaffold_20_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

8741..10054
DNA (1314bp) protein (438aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K13015 UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.-] Tax=RBG_16_RIF_WS3X_71_46_curated
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XQ9_SOLUE id=5225362 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_scaffold_20_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

10248..11372
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003782EE1
undecaprenyl-phosphate galactose phosphotransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
undecaprenyl-phosphate galactose phosphotransferase
13_1_40cm_scaffold_20_11
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11418..12419
DNA (1002bp) protein (334aa)
oxidoreductase domain-containing protein id=15192123 bin=GWC2_NOV_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=GWC2_NOV_55_46 organism_group=Proteobacteria
oxidoreductase domain-containing protein Tax=GWC2_Deltaproteobacteria_55_46b_curated
oxidoreductase domain-containing protein
13_1_40cm_scaffold_20_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

12416..12913
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000368B15B
hexapaptide repeat-containing transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hexapaptide repeat-containing transferase
13_1_40cm_scaffold_20_13
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

12910..14124
DNA (1215bp) protein (405aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGW6_SYNFM
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
13_1_40cm_scaffold_20_14
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14216..15268
DNA (1053bp) protein (351aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ABU56901.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ABU56901.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NHF4_ROSCS
13_1_40cm_scaffold_20_15

Not on your lists

15280..16968
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365DB46
Uncharacterized protein {ECO:0000313|EMBL:EKD29007.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
oxidoreductase domain-containing protein
13_1_40cm_scaffold_20_16
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

16965..18119
DNA (1155bp) protein (385aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50) Tax=GWF2_Lentisphaerae_57_35_curated
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
DegT/DnrJ/EryC1/StrS aminotransferase id=4103717 bin=GWF2_Lentisphaerae_57_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
13_1_40cm_scaffold_20_17
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

18186..19904
DNA (1719bp) protein (573aa)
hypothetical protein Tax=RBG_13_Nitrospirae_39_12_curated
Putative uncharacterized protein id=4361891 bin=GWF2_Lentisphaerae_57_35 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
13_1_40cm_scaffold_20_18
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

19920..21215
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00037D7BD7
group 1 glycosyl transferase Tax=RBG_13_Planctomycetes_44_8b_curated
group 1 glycosyl transferase
13_1_40cm_scaffold_20_19
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21358..22152
DNA (795bp) protein (265aa)
Methionyl-tRNA formyltransferase n=1 Tax=Geobacillus thermoglucosidasius (strain C56-YS93) RepID=F8CWV2_GEOTC
formyl transferase-like protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
methionyl-tRNA formyltransferase
13_1_40cm_scaffold_20_20
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22149..23552
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000370CC2A
Uncharacterized protein {ECO:0000313|EMBL:ETX05771.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_scaffold_20_21
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

23678..24862
DNA (1185bp) protein (395aa)
glycoside hydrolase family protein Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
13_1_40cm_scaffold_20_22
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

24869..26185
DNA (1317bp) protein (439aa)
nucleotide sugar dehydrogenase (EC:1.1.1.132); K00066 GDP-mannose 6-dehydrogenase [EC:1.1.1.132] Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
nucleotide sugar dehydrogenase (EC:1.1.1.132)
Nucleotide sugar dehydrogenase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B6K9_9DELT
13_1_40cm_scaffold_20_23
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

26343..27218
DNA (876bp) protein (292aa)
Glycosyl transferase, family 2 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGV6_SYNFM
glycosyl transferase family protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
glycosyl transferase family protein
13_1_40cm_scaffold_20_24
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27401..28726
DNA (1326bp) protein (442aa)
O-antigen polymerase id=1750053 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
O-antigen polymerase Tax=GWD2_Desulfuromonadales_54_10_curated
exopolysaccharide biosynthesis lipoprotein
13_1_40cm_scaffold_20_25
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(28811..30562)
DNA (1752bp) protein (584aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
gem:GM21_3182 hypothetical protein id=16778 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
13_1_40cm_scaffold_20_26
unknown

Not on your lists

comp(30684..30833)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_scaffold_20_27
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30867..32054
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=B5EGZ2_GEOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACH38094.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjien
13_1_40cm_scaffold_20_28
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32051..32947
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003761D97
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein
13_1_40cm_scaffold_20_29
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32965..34788
DNA (1824bp) protein (608aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037A63B8
asparagine synthase
13_1_40cm_scaffold_20_30
unknown

Not on your lists

34785..34898
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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